RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 H3BQV1 296 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 NFIBO00712 420 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 DTNBO60941 627 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 GNRH1P01148 92 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 HOXD10P28358 340 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 PSMC4P43686 418 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
TIMP1-201ENST00000218388 MCTP2Q6DN12 878 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 ZNF296Q8WUU4 475 aaPredicted RBP15.12■□□□□ 0.01
TIMP1-201ENST00000218388 A1CFQ9NQ94 594 aaKnown RBP15.12■□□□□ 0.01
TIMP1-201ENST00000218388 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
TIMP1-201ENST00000218388 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 HSPA1AP0DMV8 641 aaKnown RBP15.11■□□□□ 0.01
TIMP1-201ENST00000218388 HSPA1BP0DMV9 641 aaKnown RBP15.11■□□□□ 0.01
TIMP1-201ENST00000218388 PTPREP23469 700 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 HSD17B4P51659 736 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 FOSBP53539 338 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
TIMP1-201ENST00000218388 GHRHRQ02643 423 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 GRB14Q14449 540 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 KRT40Q6A162 431 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 REXO1Q8N1G1 1221 aaKnown RBP15.11■□□□□ 0.01
TIMP1-201ENST00000218388 DAGLBQ8NCG7 672 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 NUDT12Q9BQG2 462 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 PHF20Q9BVI0 1012 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 EHMT1Q9H9B1 1298 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 CYP39A1Q9NYL5 469 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
TIMP1-201ENST00000218388 ZNFX1Q9P2E3 1918 aaKnown RBP15.1■□□□□ 0.01
TIMP1-201ENST00000218388 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 OPLAHO14841 1288 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 MMP1P03956 469 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 ADORA2AP29274 412 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 KRT2P35908 639 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 CTCFP49711 727 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-201ENST00000218388 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
TIMP1-201ENST00000218388 BAATQ14032 418 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-201ENST00000218388 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 FBXO18Q8NFZ0 1043 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 CD99L2Q8TCZ2 262 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
TIMP1-201ENST00000218388 KCNJ14Q9UNX9 436 aa15.1■□□□□ 0.01
TIMP1-201ENST00000218388 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 B4DLN1 442 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-201ENST00000218388 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-201ENST00000218388 RGS2P41220 211 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 SLC30A10Q6XR72 485 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 DPP9Q86TI2 863 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
TIMP1-201ENST00000218388 ADD3Q9UEY8 706 aaKnown RBP15.09■□□□□ 0.01
TIMP1-201ENST00000218388 PLXNA1Q9UIW2 1896 aa15.08■□□□□ 0.01
TIMP1-201ENST00000218388 CASP8AP2Q9UKL3 1982 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 MEIS2O14770 477 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 FOXN1O15353 648 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 HSPA8P11142 646 aaKnown RBP15.08■□□□□ 0
TIMP1-201ENST00000218388 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
TIMP1-201ENST00000218388 PRMT2P55345 433 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 GUCY1B3Q02153 619 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 UBE2SQ16763 222 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 MORN1Q5T089 497 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 DNERQ8NFT8 737 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 SYTL5Q8TDW5 730 aaPredicted RBP15.08■□□□□ 0
TIMP1-201ENST00000218388 TBC1D5Q92609 795 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 SHISA4Q96DD7 197 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 ARHGAP39Q9C0H5 1083 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 DIS3Q9Y2L1 958 aaKnown RBP15.08■□□□□ 0
TIMP1-201ENST00000218388 ZSWIM8A7E2V4 1837 aa15.08■□□□□ 0
TIMP1-201ENST00000218388 DOCK3Q8IZD9 2030 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 DNAJC25-GNG10A0A024R161 153 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 VPS37CA5D8V6 355 aaPredicted RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 SYT1P21579 422 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 CTGFP29279 349 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 NSUN6Q8TEA1 469 aaKnown RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 IPO9Q96P70 1041 aaKnown RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 APBA2Q99767 749 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 GJB4Q9NTQ9 266 aa15.07■□□□□ 0
TIMP1-201ENST00000218388 BIN2Q9UBW5 565 aaPredicted RBP15.07■□□□□ 0
TIMP1-201ENST00000218388 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 STX6O43752 255 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 PGK2P07205 417 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 HOXC6P09630 235 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 CLK2P49760 499 aaKnown RBP15.06■□□□□ 0
TIMP1-201ENST00000218388 NPY5RQ15761 445 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 ARHGEF16Q5VV41 709 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 JAKMIP3Q5VZ66 844 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 MCTP1Q6DN14 999 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 TRMT44Q8IYL2 757 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms