RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 PRLRP16471 622 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 CYP27A1Q02318 531 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 SELENOOQ9BVL4 669 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 SNX12Q9UMY4 172 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 PLAGL2Q9UPG8 496 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 JRKLQ9Y4A0 524 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 TRIM58Q8NG06 486 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 ZMYND12Q9H0C1 365 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 CASZ1Q86V15 1759 aa24.68■■□□□ 1.54
HTATSF1-201ENST00000218364 FKBP15Q5T1M5 1219 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 CREG2Q8IUH2 290 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 CCDC42Q96M95 316 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 PCMTD1Q96MG8 357 aaPredicted RBP24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 LZTS2Q9BRK4 669 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 TRIM34Q9BYJ4 488 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 AGPSO00116 658 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 ASIC1P78348 528 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 SPA17Q15506 151 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 AENQ8WTP8 325 aaKnown RBP24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 ACSBG1Q96GR2 724 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 JADE2Q9NQC1 790 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 TFCP2L1Q9NZI6 479 aa24.67■■□□□ 1.54
HTATSF1-201ENST00000218364 MACROD2A1Z1Q3 448 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 LCA5LO95447 670 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 RPS8P62241 208 aaKnown RBP24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 AMPD3Q01432 767 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 KRT25Q7Z3Z0 450 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 CRACR2AQ9BSW2 395 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 ANKRD2Q9GZV1 360 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 LRWD1Q9UFC0 647 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 ZMYND10O75800 440 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 FCER1AP12319 257 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 GGCXP38435 758 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 CNNM4Q6P4Q7 775 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 AMOTL1Q8IY63 956 aa24.66■■□□□ 1.54
HTATSF1-201ENST00000218364 USO1O60763 962 aaKnown RBP24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 CENPPQ6IPU0 288 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 DYNLL2Q96FJ2 89 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 EEF2KMTQ96G04 330 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 SH2D4AQ9H788 454 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 FAM184BQ9ULE4 1060 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 PPFIA4O75335 1185 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 C2orf54Q08AI8 447 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 SPTY2D1Q68D10 685 aaPredicted RBP24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 CCDC70Q6NSX1 233 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 SEMA6BQ9H3T3 888 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 SIK3Q9Y2K2 1263 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 USP17L3A6NCW0 530 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 USP17L4A6NCW7 530 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 TACC1O75410 805 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 USP17L1Q7RTZ2 530 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 KIAA0895Q8NCT3 520 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 ARHGAP20Q9P2F6 1191 aa24.65■■□□□ 1.54
HTATSF1-201ENST00000218364 NRAPQ86VF7 1730 aa24.64■■□□□ 1.54
HTATSF1-201ENST00000218364 NONOQ15233 471 aaKnown RBP eCLIP24.64■■□□□ 1.54
HTATSF1-201ENST00000218364 DDB1Q16531 1140 aa24.64■■□□□ 1.54
HTATSF1-201ENST00000218364 PCDHA13Q9Y5I0 950 aa24.64■■□□□ 1.54
HTATSF1-201ENST00000218364 MYH1P12882 1939 aa24.64■■□□□ 1.54
HTATSF1-201ENST00000218364 NKRFO15226 690 aaKnown RBP eCLIP24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 SHOX2O60902 331 aaPredicted RBP24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 GSPT2Q8IYD1 628 aaKnown RBP24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 RIN2Q8WYP3 895 aaPredicted RBP24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 MMTAG2Q9BU76 263 aaKnown RBP24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 SPZ1Q9BXG8 430 aa24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 MKNK2Q9HBH9 465 aa24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 ABCB11O95342 1321 aa24.64■■□□□ 1.53
HTATSF1-201ENST00000218364 CCDC88AQ3V6T2 1871 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 A0A0G2JS52 829 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 RGL2O15211 777 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 CCDC96Q2M329 555 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 SLC4A8Q2Y0W8 1093 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 VWA3BQ502W6 1294 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 KRT26Q7Z3Y9 468 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 DZIP1Q86YF9 867 aaKnown RBP24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 SMARCC1Q92922 1105 aaPredicted RBP24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 TMEM47Q9BQJ4 181 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 SPATA31A1Q5TZJ5 1347 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 PLEKP08567 350 aaPredicted RBP24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 TSPY3P0CV98 308 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 TSPY8P0CW00 308 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 ORC2Q13416 577 aaPredicted RBP24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 IFIH1Q9BYX4 1025 aaKnown RBP24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 CAPN6Q9Y6Q1 641 aa24.63■■□□□ 1.53
HTATSF1-201ENST00000218364 CCNT1O60563 726 aaKnown RBP24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 LETM2Q2VYF4 491 aa24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 GDAP1L1Q96MZ0 367 aa24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 RSPH14Q9UHP6 348 aa24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 IRS2Q9Y4H2 1338 aa24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 NEK8Q86SG6 692 aa24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 MARCH10Q8NA82 808 aaPredicted RBP24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 COL5A3P25940 1745 aaPredicted RBP24.62■■□□□ 1.53
HTATSF1-201ENST00000218364 SMCR8Q8TEV9 937 aaPredicted RBP24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 NDST4Q9H3R1 872 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 USP21Q9UK80 565 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 MAGEA9P43362 315 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 KIF11P52732 1056 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 ZNF444Q8N0Y2 327 aaPredicted RBP24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 C6orf50Q9HD87 102 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
HTATSF1-201ENST00000218364 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms