RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 PANK4Q9NVE7 773 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 TACC3Q9Y6A5 838 aa10.83□□□□□ -0.68
CSTF1-201ENST00000217109 WNT7AO00755 349 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 FAM13AO94988 1023 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 CFBP00751 764 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 SNAP25P60880 206 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 RASSF7Q02833 373 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 C8orf74Q6P047 294 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 RASGRP2Q7LDG7 609 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 SPICE1Q8N0Z3 855 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 NOX5Q96PH1 765 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 LSM14BQ9BX40 385 aaKnown RBP10.82□□□□□ -0.68
CSTF1-201ENST00000217109 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
CSTF1-201ENST00000217109 VAV2P52735 878 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 DBNDD1Q9H9R9 158 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 MEIS1O00470 390 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 ZEB2O60315 1214 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 ERLIN2O94905 339 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 TDP2O95551 362 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 STK4Q13043 487 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 SH3GLB2Q9NR46 395 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 DNM3Q9UQ16 869 aa10.82□□□□□ -0.68
CSTF1-201ENST00000217109 SHTN1A0MZ66 631 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 KIAA0754O94854 1291 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 ZNF18P17022 549 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 CDR1P51861 262 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 GPSM2P81274 684 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 ZBED6P86452 979 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 PABPC4Q13310 644 aaKnown RBP eCLIP10.81□□□□□ -0.683e-8■■■■■ 34.7
CSTF1-201ENST00000217109 ZSCAN26Q16670 478 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 SFMBT2Q5VUG0 894 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 KRT26Q7Z3Y9 468 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 CUEDC2Q9H467 287 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 THAP9Q9H5L6 903 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 AGPAT5Q9NUQ2 364 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 KLHL7Q8IXQ5 586 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 RDH13Q8NBN7 331 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 TRIM58Q8NG06 486 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 GJA10Q969M2 543 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 NDST4Q9H3R1 872 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 FAM205AQ6ZU69 1335 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 GCNT3O95395 438 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 TTLL1O95922 423 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 TFRCP02786 760 aaKnown RBP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 EIF4A3P38919 411 aaKnown RBP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 HAUS3Q68CZ6 603 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 ANKRD40Q6AI12 368 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 TRIM65Q6PJ69 517 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 FAN1Q9Y2M0 1017 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 ADAM9Q13443 819 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
CSTF1-201ENST00000217109 USP17L6PQ6QN14 398 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 DDX12PQ92771 950 aa10.81□□□□□ -0.68
CSTF1-201ENST00000217109 DDX39AO00148 427 aaKnown RBP10.8□□□□□ -0.68
CSTF1-201ENST00000217109 TRIM37O94972 964 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 MOCS3O95396 460 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 SBK1Q52WX2 424 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 HS2ST1Q7LGA3 356 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 TAX1BP1Q86VP1 789 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 TRIM9Q9C026 710 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 CCDC113Q9H0I3 377 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 GOLGA6BA6NDN3 693 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 GDF11O95390 407 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 RASA1P20936 1047 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
CSTF1-201ENST00000217109 C2orf54Q08AI8 447 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 ASIC2Q16515 512 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 TPH2Q8IWU9 490 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 NT5C3AQ9H0P0 336 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 MYO1AQ9UBC5 1043 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 LIMA1Q9UHB6 759 aaKnown RBP10.8□□□□□ -0.68
CSTF1-201ENST00000217109 A0A0U1RQJ8 604 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 BBOX1O75936 387 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 KLK7P49862 253 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 TNIP1Q15025 636 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 PTF1AQ7RTS3 328 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 DHX37Q8IY37 1157 aaKnown RBP10.8□□□□□ -0.68
CSTF1-201ENST00000217109 AFAP1L1Q8TED9 768 aa10.8□□□□□ -0.68
CSTF1-201ENST00000217109 ATRIPQ8WXE1 791 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms