RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 NHEJ1Q9H9Q4 299 aaPredicted RBP17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
SNAPC1-201ENST00000216294 MAST2Q6P0Q8 1798 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 DNA2P51530 1060 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 PDE4DQ08499 809 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 TBC1D8BQ0IIM8 1120 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 H7C1D1 291 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 ACTN2P35609 894 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 LONP1P36776 959 aaKnown RBP17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 GLIS3Q8NEA6 775 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 CAGE1Q8TC20 777 aa17.7■□□□□ 0.42
SNAPC1-201ENST00000216294 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 SLC7A5Q01650 507 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 SPAG1Q07617 926 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 MAPKAPK5Q8IW41 473 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 CNOT6LQ96LI5 555 aaKnown RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 FAM207AQ9NSI2 230 aaPredicted RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 BBOX1O75936 387 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 SYF2O95926 243 aaKnown RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 CT47A1Q5JQC4 288 aaPredicted RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 DYMQ7RTS9 669 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 DNAJC7Q99615 494 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
SNAPC1-201ENST00000216294 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 MYO1CO00159 1063 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 ORC4O43929 436 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 RNF40O75150 1001 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 IDEP14735 1019 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 USP14P54578 494 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 ASIC1P78348 528 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 USP17L2Q6R6M4 530 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 CCDC148Q8NFR7 591 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 EHD4Q9H223 541 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 MAGEC2Q9UBF1 373 aaPredicted RBP17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 CAPN6Q9Y6Q1 641 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 NCK2O43639 380 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 TSR1Q2NL82 804 aaKnown RBP17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 RRP36Q96EU6 259 aaKnown RBP17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 RSPH14Q9UHP6 348 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 MYH1P12882 1939 aa17.68■□□□□ 0.42
SNAPC1-201ENST00000216294 PPEF1O14829 653 aaPredicted RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 APBA1Q02410 837 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 GIMAP8Q8ND71 665 aaPredicted RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 COG1Q8WTW3 980 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 NOC4LQ9BVI4 516 aaKnown RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 EXOC1Q9NV70 894 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 FAM170AA1A519 330 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 KLRG2A4D1S0 409 aaPredicted RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 M0R2N6 131 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 PSMA7O14818 248 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 LRRC41Q15345 812 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 MSL1Q68DK7 614 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 ZNF772Q68DY9 489 aaPredicted RBP17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 TMC4Q7Z404 712 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 CABP7Q86V35 215 aa17.67■□□□□ 0.42
SNAPC1-201ENST00000216294 STXBP3O00186 592 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 PSMD14O00487 310 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 MOCS3O95396 460 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 TSPY3P0CV98 308 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 TSPY8P0CW00 308 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 GGCXP38435 758 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 CCDC88AQ3V6T2 1871 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 GOLGA5Q8TBA6 731 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 RRP15Q9Y3B9 282 aaKnown RBP17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 PLSCR1O15162 318 aa17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 PCP11498 1178 aaKnown RBP17.66■□□□□ 0.42
SNAPC1-201ENST00000216294 IL1R1P14778 569 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms