RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GPAA1O43292 621 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 ESRRAP11474 423 aaPredicted RBP11.38□□□□□ -0.59
VCL-201ENST00000211998 ARHGAP4P98171 946 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 TAF12Q16514 161 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 HERC4Q5GLZ8 1057 aaPredicted RBP11.38□□□□□ -0.59
VCL-201ENST00000211998 TCP11X2Q5H9J9 407 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 CASC4Q6P4E1 433 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 KBTBD3Q8NAB2 608 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 PANX2Q96RD6 677 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 RTEL1Q9NZ71 1219 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 PTPN22Q9Y2R2 807 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 IFNB1P01574 187 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
VCL-201ENST00000211998 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
VCL-201ENST00000211998 E7EWF7 191 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 STXBP3O00186 592 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
VCL-201ENST00000211998 CORO7P57737 925 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 POLR2FP61218 127 aaKnown RBP11.37□□□□□ -0.59
VCL-201ENST00000211998 TIMM10P62072 90 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ARHGAP44Q17R89 818 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ATG3Q9NT62 314 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 INSRP06213 1382 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 CFAP73A6NFT4 308 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 DNAJC6O75061 913 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 STAT1P42224 750 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 BIRC3Q13489 604 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 CABP7Q86V35 215 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 LRGUKQ96M69 825 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 OLFM3Q96PB7 478 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 RASGRF2O14827 1237 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 KRT10P13645 584 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
VCL-201ENST00000211998 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 PPWD1Q96BP3 646 aaKnown RBP11.37□□□□□ -0.59
VCL-201ENST00000211998 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
VCL-201ENST00000211998 USP19O94966 1318 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 SPAG7O75391 227 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 BCRP11274 1271 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ADCY7P51828 1080 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 NONOQ15233 471 aaKnown RBP eCLIP11.37□□□□□ -0.594e-7■■■■□ 19.6
VCL-201ENST00000211998 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 NEK9Q8TD19 979 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 PLXNC1O60486 1568 aa11.37□□□□□ -0.59
VCL-201ENST00000211998 DIAPH2O60879 1101 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 NDUFA10O95299 355 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 PPP2R5DQ14738 602 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 TMED2Q15363 201 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 NUB1Q9Y5A7 615 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 NAIF1Q69YI7 327 aaPredicted RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 MAGOHBQ96A72 148 aaKnown RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 EIF2AQ9BY44 585 aaKnown RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 DRP2Q13474 957 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 OTUD6AQ7L8S5 288 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 ZBTB10Q96DT7 871 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 TBK1Q9UHD2 729 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 FTCDO95954 541 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 GRM1Q13255 1194 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 KIAA0232Q92628 1395 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 H0YIN7 160 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 CTIFO43310 598 aaKnown RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 MAN1A2O60476 641 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 SRGAP2O75044 1071 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 GNA14O95837 355 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 EIF6P56537 245 aaKnown RBP11.36□□□□□ -0.59
VCL-201ENST00000211998 SP4Q02446 784 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 GCKRQ14397 625 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 BBOF1Q8ND07 529 aa11.36□□□□□ -0.59
VCL-201ENST00000211998 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 ZBED4O75132 1171 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 DCTN3O75935 186 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 ATP5HO75947 161 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 INPP1P49441 399 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 SNX29Q8TEQ0 813 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 MIS12Q9H081 205 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 KIF9Q9HAQ2 790 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 SAMSN1Q9NSI8 373 aaKnown RBP11.35□□□□□ -0.59
VCL-201ENST00000211998 EPS15L1Q9UBC2 864 aa11.35□□□□□ -0.59
VCL-201ENST00000211998 KCNG1Q9UIX4 513 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms