RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 RMND1Q9NWS8 449 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
EFNB1-201ENST00000204961 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
EFNB1-201ENST00000204961 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 FAM107BQ9H098 131 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 ADAMTSL3P82987 1691 aa16.82■□□□□ 0.28
EFNB1-201ENST00000204961 TRAF5O00463 557 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 SLC37A4O43826 429 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 BMP15O95972 392 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 GFPT1Q06210 699 aaPredicted RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 NONOQ15233 471 aaKnown RBP eCLIP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 KCNK18Q7Z418 384 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 RPGRQ92834 1020 aaKnown RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 FEZ2Q9UHY8 353 aaPredicted RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 ANAPC4Q9UJX5 808 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 BAG3O95817 575 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 OR52Z1P0C646 297 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 SPAG1Q07617 926 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 LEKR1Q6ZMV7 388 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 AK7Q96M32 723 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 LIMA1Q9UHB6 759 aaKnown RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 CAPN6Q9Y6Q1 641 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 CCDC151A5D8V7 595 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L22D6RA61 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 H7C1D1 291 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 STXBP3O00186 592 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 RASA1P20936 1047 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 EIF4A3P38919 411 aaKnown RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 KIF5AQ12840 1032 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 CCDC40Q4G0X9 1142 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 USP17L6PQ6QN14 398 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 SND1Q7KZF4 910 aaKnown RBP eCLIP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 GOLGA6L1Q8N7Z2 621 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
EFNB1-201ENST00000204961 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
EFNB1-201ENST00000204961 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 STAT3P40763 770 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 P2RX5Q93086 422 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 CCDC47Q96A33 483 aaKnown RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 FTCDO95954 541 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 LLGL1Q15334 1064 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 PCDHAC2Q9Y5I4 1007 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 USH1GQ495M9 461 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 REXO1Q8N1G1 1221 aaKnown RBP16.8■□□□□ 0.28
EFNB1-201ENST00000204961 FAM53CQ9NYF3 392 aa16.8■□□□□ 0.28
EFNB1-201ENST00000204961 SPATA31A1Q5TZJ5 1347 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 MYMKA6NI61 221 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 KRT86O43790 486 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 KLRC4O43908 158 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 MYH14Q7Z406 1995 aaKnown RBP16.79■□□□□ 0.28
EFNB1-201ENST00000204961 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 E9PMD0 336 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 TUBB4AP04350 444 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 GUCY2FP51841 1108 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 CYP4A11Q02928 519 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 CALCRLQ16602 461 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 CNBD1Q8NA66 436 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 NAA15Q9BXJ9 866 aaKnown RBP16.79■□□□□ 0.28
EFNB1-201ENST00000204961 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
EFNB1-201ENST00000204961 ZNF142P52746 1687 aaPredicted RBP16.79■□□□□ 0.28
EFNB1-201ENST00000204961 ATP1A2P50993 1020 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 GPSM2P81274 684 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 SF3B3Q15393 1217 aaKnown RBP16.78■□□□□ 0.28
EFNB1-201ENST00000204961 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 SEMA6BQ9H3T3 888 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 DMGDHQ9UI17 866 aaKnown RBP16.78■□□□□ 0.28
EFNB1-201ENST00000204961 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
EFNB1-201ENST00000204961 LAMB4A4D0S4 1761 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 UBXN2AP68543 259 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 PLS1Q14651 629 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 LRRC53A6NM62 1247 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 ZNF263O14978 683 aa16.78■□□□□ 0.28
EFNB1-201ENST00000204961 RNF40O75150 1001 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms