RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 TNRQ92752 1358 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
ITGB4-201ENST00000200181 SKIP12755 728 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 DMP1Q13316 513 aaPredicted RBP18.68■□□□□ 0.58
ITGB4-201ENST00000200181 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 NRBF2Q96F24 287 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
ITGB4-201ENST00000200181 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 EPB41L5Q9HCM4 733 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 DDX25Q9UHL0 483 aaKnown RBP18.68■□□□□ 0.58
ITGB4-201ENST00000200181 DAAM1Q9Y4D1 1078 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 ZMYM6O95789 1325 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 MFAP3P55082 362 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 PRKG1Q13976 671 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 NEK8Q86SG6 692 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 CMTR1Q8N1G2 835 aaKnown RBP18.68■□□□□ 0.58
ITGB4-201ENST00000200181 NPATQ14207 1427 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 RIMS2Q9UQ26 1411 aa18.68■□□□□ 0.58
ITGB4-201ENST00000200181 ENC1O14682 589 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 HOXC9P31274 260 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 N4BP2L2Q92802 583 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-201ENST00000200181 CCDC127Q96BQ5 260 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 PTK2Q05397 1052 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 MYO1FO00160 1098 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 HEXIM1O94992 359 aaKnown RBP18.67■□□□□ 0.58
ITGB4-201ENST00000200181 SESTD1Q86VW0 696 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
ITGB4-201ENST00000200181 TEKT3Q9BXF9 490 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 A0A087WUV0 522 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-201ENST00000200181 TTI1O43156 1089 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 CASP14P31944 242 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 ZC4H2Q9NQZ6 224 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 CDC25BP30305 580 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 FIS1Q9Y3D6 152 aa18.67■□□□□ 0.58
ITGB4-201ENST00000200181 FRMPD2Q68DX3 1309 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-201ENST00000200181 HNRNPCL2B2RXH8 293 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 HNRNPCL1O60812 293 aaKnown RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 SYF2O95926 243 aaKnown RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ATP8A1Q9Y2Q0 1164 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ACTN1P12814 892 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 BPIFB4P59827 614 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ARMC9Q7Z3E5 817 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ABCC1P33527 1531 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 SORBS3O60504 671 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 FAM26FQ5R3K3 315 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 PGBD1Q96JS3 809 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 CNOT10Q9H9A5 744 aaKnown RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ACTR5Q9H9F9 607 aaPredicted RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
ITGB4-201ENST00000200181 POLR2MP0CAP2 368 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 DISC1Q9NRI5 854 aa18.66■□□□□ 0.58
ITGB4-201ENST00000200181 ECEL1O95672 775 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 ART3Q13508 389 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 TRIM11Q96F44 468 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 KPNA2P52292 529 aaKnown RBP18.65■□□□□ 0.58
ITGB4-201ENST00000200181 KIF22Q14807 665 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 BBS5Q8N3I7 341 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 PCDHB4Q9Y5E5 795 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 TOM1L1O75674 476 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 NDUFA8P51970 172 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 PLTPP55058 493 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 SYMPKQ92797 1274 aaKnown RBP18.65■□□□□ 0.58
ITGB4-201ENST00000200181 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 PFKFB2O60825 505 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 C2orf54Q08AI8 447 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 SGO2Q562F6 1265 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 CLIC6Q96NY7 704 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 CENPKQ9BS16 269 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 POLR3CQ9BUI4 534 aaPredicted RBP18.65■□□□□ 0.58
ITGB4-201ENST00000200181 PYCARDQ9ULZ3 195 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 E2F4Q16254 413 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 CYP4F22Q6NT55 531 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 TRMT10CQ7L0Y3 403 aaKnown RBP18.65■□□□□ 0.58
ITGB4-201ENST00000200181 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.65■□□□□ 0.58
ITGB4-201ENST00000200181 JRKLQ9Y4A0 524 aa18.65■□□□□ 0.58
ITGB4-201ENST00000200181 MT-ND3P03897 115 aa18.64■□□□□ 0.58
ITGB4-201ENST00000200181 TMOD1P28289 359 aa18.64■□□□□ 0.58
ITGB4-201ENST00000200181 ATG16L1Q676U5 607 aa18.64■□□□□ 0.58
ITGB4-201ENST00000200181 FBXL13Q8NEE6 735 aa18.64■□□□□ 0.58
ITGB4-201ENST00000200181 FAM193BQ96PV7 902 aaPredicted RBP18.64■□□□□ 0.58
ITGB4-201ENST00000200181 NUP160Q12769 1436 aa18.64■□□□□ 0.58
ITGB4-201ENST00000200181 ZMYND10O75800 440 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 HOXB7P09629 217 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 MAPK4P31152 587 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 LONP1P36776 959 aaKnown RBP18.64■□□□□ 0.57
ITGB4-201ENST00000200181 GALNT17Q6IS24 598 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 SUCLA2Q9P2R7 463 aaPredicted RBP18.64■□□□□ 0.57
ITGB4-201ENST00000200181 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 SERPINI1Q99574 410 aa18.64■□□□□ 0.57
ITGB4-201ENST00000200181 MRPL11Q9Y3B7 192 aaKnown RBP18.64■□□□□ 0.57
ITGB4-201ENST00000200181 ATP5JP18859 108 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms