RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CXCR5P32302 372 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 GPSM2P81274 684 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 GPS2Q13227 327 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 HDXQ7Z353 690 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 ZNF804AQ7Z570 1209 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CCDC42Q96M95 316 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CCSER1Q9C0I3 900 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 NHEJ1Q9H9Q4 299 aaPredicted RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 NAP1L1P55209 391 aaKnown RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 CASP8Q14790 479 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 HSP90B2PQ58FF3 399 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 NLRC4Q9NPP4 1024 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 SAR1BQ9Y6B6 198 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 ZNF507Q8TCN5 953 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 HAUS4Q9H6D7 363 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 MLXIPQ9HAP2 919 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CD209Q9NNX6 404 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 ARAP2Q8WZ64 1704 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 M0R2N6 131 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 AKR1B10O60218 316 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CYLC1P35663 651 aaPredicted RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 ARID5AQ03989 594 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 WHAMMP3Q1A5X7 153 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 KRT25Q7Z3Z0 450 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 MXD3Q9BW11 206 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 POLD4Q9HCU8 107 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 EHD2Q9NZN4 543 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 CAPN11Q9UMQ6 739 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 A0A0U1RQG5 324 aaPredicted RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
CDC27-201ENST00000066544 SLC37A4O43826 429 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 GNA11P29992 359 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 GTF2IP78347 998 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 L1RE1Q9UN81 338 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
CDC27-201ENST00000066544 MYMKA6NI61 221 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KRT86O43790 486 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 GRAPQ13588 217 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 CALCRLQ16602 461 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KIAA0895Q8NCT3 520 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 GRAPLQ8TC17 118 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 SNX29Q8TEQ0 813 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 MMTAG2Q9BU76 263 aaKnown RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 RTFDC1Q9BY42 306 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 FLT1P17948 1338 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 PDS5AQ29RF7 1337 aaKnown RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 RASSF10A6NK89 507 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 GSTO1P78417 241 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 C2orf54Q08AI8 447 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 RRAGAQ7L523 313 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 CALCOCO1Q9P1Z2 691 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 FAM196BA6NMK8 535 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 LRRIQ3A6PVS8 624 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 TULP1O00294 542 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 SRGNP10124 158 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 SCNN1DP51172 638 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 AMPD2Q01433 879 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KIF5AQ12840 1032 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KCNB1Q14721 858 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KCTD19Q17RG1 926 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 SV2BQ7L1I2 683 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 KCNK18Q7Z418 384 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 ZMYND12Q9H0C1 365 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 THAP9Q9H5L6 903 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 RABEP2Q9H5N1 569 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 PDE2AO00408 941 aaPredicted RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 CAPN2P17655 700 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 APBA1Q02410 837 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 SPA17Q15506 151 aa9.24□□□□□ -0.93
CDC27-201ENST00000066544 COL14A1Q05707 1796 aaKnown RBP9.24□□□□□ -0.93
CDC27-201ENST00000066544 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 AKR1B1P15121 316 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 KRT83P78385 493 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 TDRD12Q587J7 1177 aaKnown RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 DHTKD1Q96HY7 919 aaPredicted RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 ZSCAN26Q16670 478 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 PTPROQ16827 1216 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 MSANTD4Q8NCY6 345 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 DNAJC7Q99615 494 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 EIF3JO75822 258 aaKnown RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 MOCS3O95396 460 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 RNASE9P60153 205 aaKnown RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 PPARDQ03181 441 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
CDC27-201ENST00000066544 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 NHSL1Q5SYE7 1610 aa9.23□□□□□ -0.93
CDC27-201ENST00000066544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms