RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
RTFDC1-201ENST00000023939 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 CBFA2T2O43439 604 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 SLC26A4O43511 780 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 RASSF7Q02833 373 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 KCNB1Q14721 858 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 MIGA2Q7L4E1 593 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 MED15Q96RN5 788 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 XPO4Q9C0E2 1151 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 RPN1P04843 607 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 CASP1P29466 404 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 TECP42680 631 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 GTPBP4Q9BZE4 634 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 RANBP17Q9H2T7 1088 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-201ENST00000023939 EGFRP00533 1210 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 ATP1A3P13637 1013 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 PLCG1P19174 1290 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 TXKP42681 527 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 GSDMDP57764 484 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 SPATA1Q5VX52 437 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 SPICE1Q8N0Z3 855 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 RASSF8Q8NHQ8 419 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 BLZF1Q9H2G9 400 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 STK17AQ9UEE5 414 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 FEM1BQ9UK73 627 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
RTFDC1-201ENST00000023939 OPLAHO14841 1288 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 LRRC15Q8TF66 581 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 STAMQ92783 540 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 HAS1Q92839 578 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 C7orf25Q9BPX7 421 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 SPTLC3Q9NUV7 552 aa16.12■□□□□ 0.17
RTFDC1-201ENST00000023939 TBX3O15119 743 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 OFD1O75665 1012 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 SREBF1P36956 1147 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 KLRC4O43908 158 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 CIITAP33076 1130 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 UBASH3AP57075 661 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 AMPD3Q01432 767 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 GRB10Q13322 594 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 LRRC8AQ8IWT6 810 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 CACTINQ8WUQ7 758 aaKnown RBP16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 LPAR1Q92633 364 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 KIAA1683Q9H0B3 1180 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 DEFB129Q9H1M3 183 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 RWDD2AQ9UIY3 292 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
RTFDC1-201ENST00000023939 ZNF541Q9H0D2 1346 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 SYNRGQ9UMZ2 1314 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 PSDA5PKW4 1024 aaPredicted RBP16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 SERPINC1P01008 464 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 CYP3A4P08684 503 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 SNAP25P60880 206 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 Q4G0T1 1027 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 HYIQ5T013 277 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 CDKAL1Q5VV42 579 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 SLFN12Q8IYM2 578 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 P2RX7Q99572 595 aaKnown RBP16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 TRIM9Q9C026 710 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 PYCARDQ9ULZ3 195 aa16.1■□□□□ 0.17
RTFDC1-201ENST00000023939 GJA3Q9Y6H8 435 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms