RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ADCY7P51828 1080 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 NEK8Q86SG6 692 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SCHIP1Q9P0W5 487 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RGS12O14924 1447 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 OCA2Q04671 838 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 BFSP1Q12934 665 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 KRT81Q14533 505 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 CYTH1Q15438 398 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PROM2Q8N271 834 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 GIMAP8Q8ND71 665 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 CHURC1Q8WUH1 139 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 DHX58Q96C10 678 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SPDL1Q96EA4 605 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 MOV10L1Q9BXT6 1211 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 MBIPQ9NS73 344 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 ADGRL3Q9HAR2 1447 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SAMD9LQ8IVG5 1584 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 IQANK1A0A1B0GTG1 560 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 TLDC2A0PJX2 215 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RIPPLY1Q0D2K3 151 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 EIF2B5Q13144 721 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 KHDRBS2Q5VWX1 349 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 JADE1Q6IE81 842 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 POP5Q969H6 163 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PPWD1Q96BP3 646 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SLC13A4Q9UKG4 626 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 CDV3Q9UKY7 258 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 A0A087WUV0 522 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 KRIT1O00522 736 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 APOA1P02647 267 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 APOEP02649 317 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 NEK2P51955 445 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 A6NJR5 290 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 MAP3K13O43283 966 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 DDAH1O94760 285 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RHOXF2BP0C7M4 288 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RBM17Q96I25 401 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RHOXF2Q9BQY4 288 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 ATP7BP35670 1465 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 FOXP3Q9BZS1 431 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 HESX1Q9UBX0 185 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 TNRQ92752 1358 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SMAPO00193 183 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 YARSP54577 528 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 FLOT2Q14254 428 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 RRS1Q15050 365 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 KYAT1Q16773 422 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 TMEM206Q9H813 350 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 POLR2DO15514 142 aaKnown RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ESRRBO95718 433 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 PDE4DQ08499 809 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 BEND3Q5T5X7 828 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 TTC13Q8NBP0 860 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 XAB2Q9HCS7 855 aaKnown RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 VWA3AA6NCI4 1184 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 GOLGA8RI6L899 631 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SERPINB6P35237 376 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 PTK2Q05397 1052 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 PSMD1Q99460 953 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 KRT37O76014 449 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 GGPS1O95749 300 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 TNNC2P02585 160 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ZFXP17010 805 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 CDH2P19022 906 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 KIF22Q14807 665 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 KRT80Q6KB66 452 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 CDK12Q9NYV4 1490 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ATF2P15336 505 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ZSWIM4Q9H7M6 989 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 RTCBQ9Y3I0 505 aaKnown RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 NOS1P29475 1434 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 M0R3G1 203 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SMARCA1P28370 1054 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 FANCCQ00597 558 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 LRRC63Q05C16 580 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 UAP1Q16222 522 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SYT10Q6XYQ8 523 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 TTC17Q96AE7 1141 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 RMDN2Q96LZ7 410 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 EPS8L2Q9H6S3 715 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 STRIP2Q9ULQ0 834 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 CHMP2BQ9UQN3 213 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ZNF644Q9H582 1327 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 SLC1A4P43007 532 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 ARID5AQ03989 594 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 TFDP1Q14186 410 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 CCDC13Q8IYE1 715 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 FMO2Q99518 471 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 TMEM60Q9H2L4 133 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 FOXP1Q9H334 677 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 MIF4GDA9UHW6 222 aaKnown RBP6.59□□□□□ -1.35
VPS13D-201ENST00000011700 GRM1Q13255 1194 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 MAPRE2Q15555 327 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms