RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 VAV2P52735 878 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 SIK1P57059 783 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 DHTKD1Q96HY7 919 aaPredicted RBP15.64■□□□□ 0.09
USH1C-201ENST00000005226 SALL4Q9UJQ4 1053 aa15.64■□□□□ 0.09
USH1C-201ENST00000005226 TARSL2A2RTX5 802 aaKnown RBP15.63■□□□□ 0.09
USH1C-201ENST00000005226 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 PPARDQ03181 441 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 SPA17Q15506 151 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 DYMQ7RTS9 669 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 IFIH1Q9BYX4 1025 aaKnown RBP15.63■□□□□ 0.09
USH1C-201ENST00000005226 CCSER1Q9C0I3 900 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 SNX12Q9UMY4 172 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 PCDHA13Q9Y5I0 950 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 FLT1P17948 1338 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 NOP2P46087 812 aaKnown RBP15.63■□□□□ 0.09
USH1C-201ENST00000005226 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
USH1C-201ENST00000005226 KIAA0895Q8NCT3 520 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 MS4A14Q96JA4 679 aa15.63■□□□□ 0.09
USH1C-201ENST00000005226 BSDC1Q9NW68 430 aaPredicted RBP15.63■□□□□ 0.09
USH1C-201ENST00000005226 GOLGA6CA6NDK9 693 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 STXBP3O00186 592 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 GOLGA6DP0CG33 693 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 MAGEA9P43362 315 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 CCT5P48643 541 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 FBXO33Q7Z6M2 555 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 CCDC170Q8IYT3 715 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 EHBP1Q8NDI1 1231 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 GLIS3Q8NEA6 775 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 PURBQ96QR8 312 aaKnown RBP15.62■□□□□ 0.09
USH1C-201ENST00000005226 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 GOLGA6AQ9NYA3 693 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 SAP30BPQ9UHR5 308 aaKnown RBP15.62■□□□□ 0.09
USH1C-201ENST00000005226 MYH10P35580 1976 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 BUB1O43683 1085 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 PCP11498 1178 aaKnown RBP15.62■□□□□ 0.09
USH1C-201ENST00000005226 MCM3P25205 808 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 IRAK1P51617 712 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 CORO7P57737 925 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 RRAGAQ7L523 313 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 SPATA4Q8NEY3 305 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 FAM76AQ8TAV0 307 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 AENQ8WTP8 325 aaKnown RBP15.62■□□□□ 0.09
USH1C-201ENST00000005226 UIMC1Q96RL1 719 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 NUP58Q9BVL2 599 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 TCP11L1Q9NUJ3 509 aa15.62■□□□□ 0.09
USH1C-201ENST00000005226 HIBADHP31937 336 aaKnown RBP15.61■□□□□ 0.09
USH1C-201ENST00000005226 KIF11P52732 1056 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 LRRC41Q15345 812 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 ARL8AQ96BM9 186 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 DEF6Q9H4E7 631 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 ATP8A2Q9NTI2 1148 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 AKR1B10O60218 316 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 TXKP42681 527 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 DIXDC1Q155Q3 683 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 GRIK5Q16478 980 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
USH1C-201ENST00000005226 MMTAG2Q9BU76 263 aaKnown RBP15.61■□□□□ 0.09
USH1C-201ENST00000005226 TMEM260Q9NX78 707 aa15.61■□□□□ 0.09
USH1C-201ENST00000005226 RNASE9P60153 205 aaKnown RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 GFPT1Q06210 699 aaPredicted RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 GRM4Q14833 912 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 RPGRIP1Q96KN7 1286 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 OSBPL9Q96SU4 736 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 SH2D4AQ9H788 454 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 BARHL2Q9NY43 387 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 ARPP21Q9UBL0 812 aaPredicted RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 BIN2Q9UBW5 565 aaPredicted RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 FAM184BQ9ULE4 1060 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 ANO9A1A5B4 782 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 LRRC53A6NM62 1247 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 TACC1O75410 805 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 OR52Z1P0C646 297 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 NAPAP54920 295 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 APBA1Q02410 837 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 RASSF7Q02833 373 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 ZNF662Q6ZS27 426 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 NOC3LQ8WTT2 800 aaKnown RBP15.6■□□□□ 0.09
USH1C-201ENST00000005226 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 KANSL2Q9H9L4 492 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 JRKLQ9Y4A0 524 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 SAMM50Q9Y512 469 aa15.6■□□□□ 0.09
USH1C-201ENST00000005226 ESYT3A0FGR9 886 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 BICDL2A1A5D9 508 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 TSPY3P0CV98 308 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 TSPY8P0CW00 308 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 NAP1L1P55209 391 aaKnown RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 ENOX2Q16206 610 aaKnown RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 USP17L2Q6R6M4 530 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 DZIP1Q86YF9 867 aaKnown RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 ERGIC2Q96RQ1 377 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 NDST4Q9H3R1 872 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
USH1C-201ENST00000005226 SMCO2A6NFE2 343 aa15.59■□□□□ 0.09
USH1C-201ENST00000005226 KLRF2D3W0D1 207 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms