RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Snrnp35Q9D384 244 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Sertad1Q9JL10 236 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Arl6ip4Q9JM93 229 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Pex3Q9QXY9 372 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Skint3A7TZF0 458 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Krt78E9Q0F0 1068 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Atp2b1G5E829 1220 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Sdc2P43407 202 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cdc25aP48964 514 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 GabpaQ00422 454 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ccdc162pQ0VG85 912 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Otud5Q3U2S4 566 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Pde5aQ8CG03 865 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Anapc4Q91W96 807 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cabp7Q91ZM8 215 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Mmtag2Q99LX5 260 aaKnown RBP8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Saal1Q9D2C2 474 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Nap1l5Q9JJF0 156 aa8.46□□□□□ -1.06
Usp40-204ENSMUST00000187758 Pcif1P59114 706 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Zfp91Q62511 572 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Zcwpw1Q6IR42 630 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cep128Q8BI22 1102 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Serpinb13Q8CDC0 389 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ifih1Q8R5F7 1025 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 NapaQ9DB05 295 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Rcan3Q9JKK0 239 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 S1pr4Q9Z0L1 386 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Pcdha4O88689 947 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Bach1P97302 739 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ehd2Q8BH64 543 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fbxo18Q8K2I9 1042 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Hmgn5Q9JL35 406 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Large1Q9Z1M7 756 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fem1bQ9Z2G0 627 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 AoahO35298 574 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Hoxa11P31311 313 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ddx49Q4FZF3 480 aaKnown RBP8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ccna1Q61456 421 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cnnm4Q69ZF7 771 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Siglec10Q80ZE3 688 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Acat1Q8QZT1 424 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 HlcsQ920N2 722 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Sapcd2Q9D818 391 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Sgpp1Q9JI99 430 aa8.45□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fyb2A2A995 729 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Map4k1P70218 827 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Kif5bQ61768 963 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 GypcQ78HU7 95 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 DnerQ8JZM4 737 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Rexo5D3YW29 759 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Mroh8E9PYI4 1049 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Esr2O08537 530 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Mex3cQ05A36 652 aaKnown RBP8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Psg29Q3URN6 468 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Lrrc36Q3V0M2 755 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Nt5c2Q3V1L4 560 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Kcnj11Q61743 390 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ero1bQ8R2E9 467 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Krt79Q8VED5 531 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Tmx2Q9D710 295 aaKnown RBP8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Scn3aA2ASI5 1947 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Krt18P05784 423 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Hoxc10P31257 342 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Rasa2P58069 847 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Brd9Q3UQU0 596 aaKnown RBP8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cnksr2Q80YA9 1032 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fermt2Q8CIB5 680 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Gprc5cQ8K3J9 440 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Dnajc19Q9CQV7 116 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ankrd1Q9CR42 319 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 SerhlQ9EPB5 311 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Atp12aQ9Z1W8 1035 aa8.44□□□□□ -1.06
Usp40-204ENSMUST00000187758 Serpina16D3Z660 418 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 NfibP97863 570 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Siah1bQ06985 282 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Arl14Q3SXC5 192 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Gse1Q3U3C9 1213 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Lrrfip1Q3UZ39 729 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Supt20hQ7TT00 530 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ccdc122Q8BVN0 290 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Lmbrd1Q8K0B2 537 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 DaglbQ91WC9 669 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Tubgcp2Q921G8 905 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 MbipQ99LQ1 341 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Bcs1lQ9CZP5 418 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Baiap2l1Q9DBJ3 514 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fxr2Q9WVR4 673 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Rsph10bE9PYQ0 876 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Tbc1d30Q69ZT9 766 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Pgrmc2Q80UU9 217 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Kcnv2Q8CFS6 562 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Appl2Q8K3G9 662 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Golph3lQ8R088 285 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Trub2Q91WG3 331 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Cspp1B2RX88 1205 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Ccdc84Q4VA36 332 aaKnown RBP8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Senp7Q8BUH8 1037 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 CnstQ8CBC4 711 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Fam83aQ8K2P2 436 aa8.43□□□□□ -1.06
Usp40-204ENSMUST00000187758 Stard7Q8R1R3 373 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms