RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Krt28A6BLY7 462 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Zc3h7bF8VPP8 982 aaKnown RBP9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 B020004C17RikJ3QP07 232 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cplx1P63040 134 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Rhpn1Q61085 643 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ccdc66Q6NS45 935 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Smarcc2Q6PDG5 1213 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Supt20hQ7TT00 530 aaKnown RBP9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 VmacQ8BP01 174 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 DnerQ8JZM4 737 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Prpf3Q922U1 683 aaKnown RBP9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gimap3Q99MI6 301 aa9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mrpl44Q9CY73 333 aaKnown RBP9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mrvi1Q9WUX5 899 aaKnown RBP9.52□□□□□ -0.88
Trim39-205ENSMUST00000173369 Brca1P48754 1812 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 AW822073A0A0N4SUK1 652 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rexo5D3YW29 759 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp4x1Q6A152 507 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Churc1Q6DG52 112 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ano1Q8BHY3 960 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tcp11l1Q8BTG3 509 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 SltmQ8CH25 1031 aaKnown RBP9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nxf1Q99JX7 618 aaKnown RBP9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 C87977A2A958 498 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 1700006A11RikB9EHI3 544 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Parp1P11103 1013 aaKnown RBP9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Meis2P97367 477 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 GclcP97494 637 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Neurl1bQ0MW30 546 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Miga1Q4QQM5 600 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Repin1Q5U4E2 545 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 St18Q80TY4 1045 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Dlg1Q811D0 905 aaKnown RBP9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nim1kQ8BHI9 436 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Bloc1s2Q9CWG9 143 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Znhit2Q9QY66 399 aa9.52□□□□□ -0.89
Trim39-205ENSMUST00000173369 Fyb2A2A995 729 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Trim5E9PV98 497 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pdia4P08003 638 aaKnown RBP9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Aco1P28271 889 aaKnown RBP9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nploc4P60670 608 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Map4k1P70218 827 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tff2Q03404 129 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ubash3aQ3V3E1 624 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rusc1Q8BG26 893 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Kdm4cQ8VCD7 1054 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 DaglbQ91WC9 669 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 MsraQ9D6Y7 233 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Spint1Q9R097 507 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ccdc78D3Z5T1 437 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Casq1O09165 405 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Atp6v1dP57746 247 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gtf2f1Q3THK3 508 aaKnown RBP9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Brd9Q3UQU0 596 aaKnown RBP9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Zbtb7bQ64321 544 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Fam155aQ8CCS2 467 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cep57l1Q8VDS7 400 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gpr37l1Q99JG2 481 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pbx4Q99NE9 378 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ubiad1Q9DC60 336 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nr2e3Q9QXZ7 395 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nlrp5Q9R1M5 1163 aa9.51□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp2c39P56656 490 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 LyarQ08288 388 aaKnown RBP9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cnga2Q62398 664 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Prmt6Q6NZB1 378 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Mettl5Q8K1A0 209 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Kcnc4Q8R1C0 628 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 AdpgkQ8VDL4 496 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Dnajc17Q91WT4 303 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Lzts2Q91YU6 671 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Arhgef25Q9CWR0 618 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cul5Q9D5V5 780 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Dnai2A2AC93 623 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gm38392E9Q2A2 434 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gm13128L7MU96 475 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp3a25O09158 503 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 SpibO35906 267 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 NfiaQ02780 532 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rasip1Q3U0S6 961 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ecm1Q61508 559 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Zfp943Q6NZP4 507 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gigyf2Q6Y7W8 1291 aaKnown RBP9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Mrpl58Q8R035 206 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tubb6Q922F4 447 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 TbcbQ9D1E6 244 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 AllcQ9JHX6 414 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Stx6Q9JKK1 255 aa9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 AdnpQ9Z103 1108 aaKnown RBP9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 PhipQ8VDD9 1821 aaKnown RBP9.5□□□□□ -0.89
Trim39-205ENSMUST00000173369 Lnx1O70263 728 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 CgnP59242 1191 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Mrgprb1Q3UG61 350 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 C87499Q3UX49 493 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Lrrc36Q3V0M2 755 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ddx19aQ61655 478 aaKnown RBP9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 DpydQ8CHR6 1025 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Eif4enif1Q9EST3 983 aaKnown RBP9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 GdaQ9R111 454 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gm7173A0A0G2JEB6 3132 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms