RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Acbd3Q8BMP6 525 aa20.16■□□□□ 0.82
Sort1-203ENSMUST00000135636 Strip1Q8C079 837 aa20.16■□□□□ 0.82
Sort1-203ENSMUST00000135636 Pold3Q9EQ28 462 aa20.16■□□□□ 0.82
Sort1-203ENSMUST00000135636 Ube4aE9Q735 1028 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Eef1bO70251 225 aaKnown RBP20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Agbl1Q09M05 972 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 SkiQ60698 725 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Rbm41Q8JZV4 413 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Aldh1b1Q9CZS1 519 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Flt1P35969 1333 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Palb2Q3U0P1 1104 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Asap3Q5U464 904 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Ccdc125Q5U465 500 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Cavin2Q63918 418 aaKnown RBP20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Atp1a3Q6PIC6 1013 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 NapgQ9CWZ7 312 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Rasgrf1P27671 1262 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Asap2Q7SIG6 958 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Sugt1Q9CX34 336 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Xrcc6P23475 608 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Pak2Q8CIN4 524 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 PdhbQ9D051 359 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 Rsrc1Q9DBU6 334 aa20.15■□□□□ 0.82
Sort1-203ENSMUST00000135636 AatkQ80YE4 1365 aa20.14■□□□□ 0.82
Sort1-203ENSMUST00000135636 Ifi205aQ8CGE8 404 aa20.14■□□□□ 0.82
Sort1-203ENSMUST00000135636 Rad51ap2G3UW63 976 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rps6ka1P18653 724 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Stmn2P55821 179 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Agap2Q3UHD9 1186 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Taco1Q8K0Z7 294 aaKnown RBP20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tbc1d19Q8VDV7 526 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Brinp3Q499E0 766 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rassf9Q8K342 435 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Dnajc17Q91WT4 303 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 IydQ9DCX8 285 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 TdgP56581 421 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Smad1P70340 465 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Atad3Q925I1 591 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Mei1Q9D4I2 1268 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cmtm5Q9D6G9 156 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Osbpl5Q9ER64 874 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rilpl1Q9JJC6 406 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 1700122O11RikJ3QPW6 241 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rbp3P49194 1234 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ckap2Q3V1H1 664 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 BC048507Q80ZS7 89 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tmem179Q8BHH9 233 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cdk8Q8R3L8 464 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Lonp2Q9DBN5 852 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Clic4Q9QYB1 253 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Prkab1Q9R078 270 aa20.14■□□□□ 0.81
Sort1-203ENSMUST00000135636 Nlrp1aQ2LKU9 1182 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Zbtb41Q811F1 908 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Terb1Q8C0V1 768 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Arhgap33Q80YF9 1305 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ddx19bQ8BZY3 494 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Bag2Q91YN9 210 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Pcsk1nQ9QXV0 258 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Olfr397Q8VEZ6 315 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Lamc2Q61092 1191 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Slc26a7Q8R2Z3 656 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tmem132aQ922P8 1018 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Utp18Q5SSI6 552 aaKnown RBP20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Parp10Q8CIE4 960 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Col4a3bpQ9EQG9 624 aa20.13■□□□□ 0.81
Sort1-203ENSMUST00000135636 Pfdn6Q03958 127 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 GhdcQ99J23 532 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cnot7Q60809 285 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Fbxl5Q8C2S5 690 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Fam160b1Q8CDM8 764 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 McamQ8R2Y2 648 aaKnown RBP20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Fmnl1Q9JL26 1094 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Nedd9O35177 833 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rfc1P35601 1131 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Polr2bQ8CFI7 1174 aaKnown RBP20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Tom1l1Q923U0 474 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gm16486A0A1D5RMD1 1434 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Mroh8E9PYI4 1049 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Polr3eQ9CZT4 710 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Akap8Q9DBR0 687 aaKnown RBP20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gpaa1Q9WTK3 621 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Mug2P28666 1451 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Rreb1Q3UH06 1700 aaKnown RBP20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ighmbp2P40694 993 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Myo1gQ5SUA5 1024 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Churc1Q6DG52 112 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Olfr390Q8VEZ7 311 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 Kat6bQ8BRB7 1872 aa20.12■□□□□ 0.81
Sort1-203ENSMUST00000135636 PrkcshO08795 521 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Svs3bQ8BZH8 265 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Plcg2Q8CIH5 1265 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Ttc13A0A1L1SSC7 844 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Kif23E9Q5G3 953 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cfap157Q0VFX2 523 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Q3TYL0 343 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Cdk5rap3Q99LM2 503 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Gtpbp4Q99ME9 634 aaKnown RBP20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Trpd52l3Q9CQ14 231 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 Orc4O88708 433 aa20.11■□□□□ 0.81
Sort1-203ENSMUST00000135636 OcrlQ6NVF0 900 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms