RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Map7d1A2AJI0 846 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Clrn2B2RVW2 232 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 D830030K20RikE9PYQ5 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Speer2E9Q9U2 264 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gm3043K7N693 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gm16440K7N6G6 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gm2244L7N2A3 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gm3278L7N2D2 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gm8271L7N2E2 218 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Ppef1O35655 650 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Krt18P05784 423 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Pla2g4bP0C871 782 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 H2afxP27661 143 aaKnown RBP8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Kif2aP28740 705 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 OatP29758 439 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cdc25aP48964 514 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Rps12P63323 132 aaKnown RBP8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Klrg2Q3UM83 387 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Rbm12b2Q66JV4 834 aaKnown RBP8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Nap1l4Q78ZA7 375 aaKnown RBP8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Vgll2Q8BGW8 322 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Ptrh1Q8BW00 204 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 MslnlQ8C160 685 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Depdc1aQ8CIG0 804 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Oxnad1Q8VE38 311 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cabp7Q91ZM8 215 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Ndfip2Q91ZP6 311 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Krt82Q99M74 516 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Mettl16Q9CQG2 553 aaKnown RBP8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Alpk1Q9CXB8 1231 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cbx6Q9DBY5 414 aa8.48□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cyp2j7A0A140T8U1 504 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cul4bA2A432 970 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Herc3A6H6S0 1050 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Dnaaf5B9EJR8 853 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Rsbn1lD3Z0K6 821 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Ccdc121E9Q6D3 323 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Lmod3E9QA62 571 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Lrrc32G3XA59 663 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Rad51bO35719 350 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Nek1P51954 1203 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Paxbp1P58501 919 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cyp2e1Q05421 493 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Map9Q3TRR0 646 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Gpr162Q3UN16 588 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Thrap3Q569Z6 951 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Ccdc93Q7TQK5 629 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Asnsd1Q8BFS9 627 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Scfd2Q8BTY8 684 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Fam114a1Q9D281 569 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Tubb4aQ9D6F9 444 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Txnrd2Q9JLT4 524 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Magi2Q9WVQ1 1275 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Fxr2Q9WVR4 673 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 NinQ61043 2035 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 1700017N19RikA0A087WPJ1 469 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Nme9A0A1L1SUL6 329 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Glt1d1A4FUP9 346 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Znf568E9PYI1 671 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Zfp597E9Q6S0 419 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Msh3P13705 1091 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 EporP14753 507 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Adssl1P28650 457 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Cap1P40124 474 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Zhx1P70121 873 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Lgr6Q3UVD5 967 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 B4galnt4Q766D5 1034 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Sval3Q76I99 144 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Fbxo11Q7TPD1 930 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Camkk2Q8C078 588 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Spata32Q8C5V0 334 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Bst2Q8R2Q8 172 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Tmx1Q8VBT0 278 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Mrpl11Q9CQF0 192 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 GrapQ9CX99 217 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Slc26a4Q9R155 780 aa8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 AdnpQ9Z103 1108 aaKnown RBP8.47□□□□□ -1.05
Trim40-201ENSMUST00000087158 Usp31E9Q6Y8 1344 aa8.46□□□□□ -1.05
Trim40-201ENSMUST00000087158 Usp17ldG5E8G2 545 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Usp17lcG5E8I7 545 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Sh3bp1P55194 680 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Meis2P97367 477 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Irf6P97431 467 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kcnb1Q03717 857 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Rnf180Q3U827 592 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pnma5Q5DTT8 618 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Stxbp3Q60770 592 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Cdc37Q61081 379 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mns1Q61884 491 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Krt39Q6IFX4 482 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Frmd3Q8BHD4 595 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Klhl30Q8C3F7 581 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ildr1Q8CBR1 537 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Havcr2Q8VIM0 281 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Anapc4Q91W96 807 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Snapc2Q91XA5 359 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tab2Q99K90 693 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Cfap45Q9D9U9 551 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ubiad1Q9DC60 336 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Elf2Q9JHC9 593 aa8.46□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms