RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Cep70Q6IQY5 616 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 GlyctkQ8QZY2 523 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Erlin1Q91X78 346 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Fer1l6E0CZ42 1862 aa16.67■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gm1993A6X8I0 212 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 SlxD3Z347 212 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Il15P48346 162 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Mcm7Q61881 719 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Pip5kl1Q6U7H8 395 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 HlfQ8BW74 295 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Vcpip1Q8CDG3 1220 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Eif4a3Q91VC3 411 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Nxnl2Q9D531 156 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Tmem47Q9JJG6 181 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Clip2Q9Z0H8 1047 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Pabpc1lA2A5N3 607 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Arid4aF8VPQ2 1261 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Prl2c2P04095 224 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Hmgb1P63158 215 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Sec31aQ3UPL0 1230 aaKnown RBP16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Osbpl1aQ91XL9 950 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Dbndd1Q9CZ00 160 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ltbp2O08999 1813 aa16.66■□□□□ 0.26
Nup54-201ENSMUST00000038514 Rps8P62242 208 aaKnown RBP16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ccdc157Q5SPX1 718 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Sco1Q5SUC9 284 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Spats2Q8K1N4 545 aaKnown RBP16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Serpinb12Q9D7P9 423 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Mkrn1Q9QXP6 481 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Gm45208A0A140LJ36 292 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Bicdl1A0JNT9 577 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Il27raO70394 623 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Sh3gl2Q62420 352 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 PnocQ64387 187 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Sdccag8Q80UF4 717 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Camsap3Q80VC9 1252 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Glrx3Q9CQM9 337 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Ndst4Q9EQW8 872 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Zfp831A2ADM8 1628 aa16.65■□□□□ 0.26
Nup54-201ENSMUST00000038514 Mboat4P0C7A3 435 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Znf667Q2TL60 609 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tnni3kQ5GIG6 834 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Lzts2Q91YU6 671 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Bcl11bQ99PV8 884 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Sel1lQ9Z2G6 790 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Otud7bB2RUR8 840 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Rpusd2Q149F1 553 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Kcnj11Q61743 390 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Matr3Q8K310 846 aaKnown RBP16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ifih1Q8R5F7 1025 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Calr3Q9D9Q6 380 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Nup188Q6ZQH8 1759 aa16.64■□□□□ 0.25
Nup54-201ENSMUST00000038514 Map3k15A2AQW0 1331 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Heg1E9Q7X6 1337 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm28919A0A087WP35 240 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Magea10A2AMW4 325 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Krt18P05784 423 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tcp1P11983 556 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Lig1P37913 916 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Surf6P70279 355 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Zmym1Q3TJB1 983 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ddb1Q3U1J4 1140 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gngt1Q61012 74 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Shc3Q61120 474 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 NntQ61941 1086 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Grm4Q68EF4 912 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Uba5Q8VE47 403 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Dnajc17Q91WT4 303 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tacc2Q9JJG0 1149 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 EvplQ9D952 2035 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 TicrrQ8BQ33 1889 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm7356A0A087WSA6 508 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Gm1758F6VZZ1 202 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Nap1l1P28656 391 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Atp1b3P97370 278 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Trim43aQ3TL54 445 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Bbof1Q3V079 533 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Spag7Q7TNE3 227 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ppm1eQ80TL0 749 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Pramel6Q810Y9 485 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Igdcc3Q8BQC3 813 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 AopepQ8BXQ6 817 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Rcor2Q8C796 523 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Eps8l2Q99K30 729 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Trap1Q9CQN1 706 aaKnown RBP16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tfap4Q9JIZ5 338 aa16.63■□□□□ 0.25
Nup54-201ENSMUST00000038514 Tsc2Q61037 1814 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 E9QMW4 1145 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Pdrg1P59048 133 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Ddx3xQ62167 662 aaKnown RBP16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Secisbp2lQ6A098 1086 aaKnown RBP16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 RragaQ80X95 313 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Myl6bQ8CI43 207 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 LgsnQ8CIX8 563 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Sde2Q8K1J5 448 aaKnown RBP16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Adarb2Q9JI20 745 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Nfu1Q9QZ23 255 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 Apol6B7ZC55 329 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 ErmardE9Q048 622 aa16.62■□□□□ 0.25
Nup54-201ENSMUST00000038514 PtgdrP70263 357 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms