RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B IME2P32581 645 aa0.55□□□□□ -2.32
snR39BsnR39B SRB5P32585 307 aa0.55□□□□□ -2.32
snR39BsnR39B FMT1P32785 401 aa0.55□□□□□ -2.32
snR39BsnR39B YBR138CP38277 524 aa0.55□□□□□ -2.32
snR39BsnR39B ANS1P38832 159 aa0.55□□□□□ -2.32
snR39BsnR39B UIP3P39547 235 aa0.55□□□□□ -2.32
snR39BsnR39B FAF1P40546 346 aaPredicted RBP0.55□□□□□ -2.32
snR39BsnR39B STR3P53101 465 aaKnown RBP0.55□□□□□ -2.32
snR39BsnR39B EMI2Q04409 500 aaKnown RBP0.55□□□□□ -2.32
snR39BsnR39B LSP1Q12230 341 aaKnown RBP0.55□□□□□ -2.32
snR39BsnR39B SAL1D6W196 494 aa0.54□□□□□ -2.32
snR39BsnR39B YCR007CP25354 239 aa0.54□□□□□ -2.32
snR39BsnR39B TFC4P33339 1025 aa0.54□□□□□ -2.32
snR39BsnR39B NAT2P37293 288 aa0.54□□□□□ -2.32
snR39BsnR39B DBP8P38719 431 aa0.54□□□□□ -2.32
snR39BsnR39B YHR131CP38835 850 aa0.54□□□□□ -2.32
snR39BsnR39B SEO1P39709 593 aa0.54□□□□□ -2.32
snR39BsnR39B ASE1P50275 885 aa0.54□□□□□ -2.32
snR39BsnR39B FLC3P53121 802 aa0.54□□□□□ -2.32
snR39BsnR39B SMM1P53720 384 aaKnown RBP0.54□□□□□ -2.32
snR39BsnR39B HER2Q03557 464 aa0.54□□□□□ -2.32
snR39BsnR39B ETT1Q08421 412 aaKnown RBP0.54□□□□□ -2.32
snR39BsnR39B ATP2P00830 511 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B PEP5P12868 1029 aa0.53□□□□□ -2.32
snR39BsnR39B SPO7P18410 259 aa0.53□□□□□ -2.32
snR39BsnR39B CRM1P30822 1084 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B NUP2P32499 720 aa0.53□□□□□ -2.32
snR39BsnR39B SNU114P36048 1008 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B TIM17P39515 158 aa0.53□□□□□ -2.32
snR39BsnR39B PFS2P42841 465 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B WWM1P43582 211 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B SCD6P45978 349 aaKnown RBP RIP-Chip data0.53□□□□□ -2.32not detected
snR39BsnR39B YJR085CP47131 105 aaKnown RBP0.53□□□□□ -2.32
snR39BsnR39B SGM1P47166 707 aa0.53□□□□□ -2.32
snR39BsnR39B SHR3Q02774 210 aa0.53□□□□□ -2.32
snR39BsnR39B PIR3Q03180 325 aa0.53□□□□□ -2.32
snR39BsnR39B RTT109Q07794 436 aa0.53□□□□□ -2.32
snR39BsnR39B PSK1P31374 1356 aa0.53□□□□□ -2.32
snR39BsnR39B FRE1P32791 686 aa0.52□□□□□ -2.33
snR39BsnR39B MNS1P32906 549 aa0.52□□□□□ -2.33
snR39BsnR39B YKL023WP36103 277 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B TSC10P38342 320 aa0.52□□□□□ -2.33
snR39BsnR39B SPC72P39723 622 aa0.52□□□□□ -2.33
snR39BsnR39B YPS6P40583 537 aa0.52□□□□□ -2.33
snR39BsnR39B GAB1P41733 394 aa0.52□□□□□ -2.33
snR39BsnR39B GWT1P47026 490 aa0.52□□□□□ -2.33
snR39BsnR39B ERG26P53199 349 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B DRN1P53255 507 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B MKC7P53379 596 aa0.52□□□□□ -2.33
snR39BsnR39B CPR6P53691 371 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B CSL4P53859 292 aaPredicted RBP0.52□□□□□ -2.33
snR39BsnR39B IRC25Q07951 179 aa0.52□□□□□ -2.33
snR39BsnR39B CUE5Q08412 411 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B FDH1Q08911 376 aa0.52□□□□□ -2.33
snR39BsnR39B THP3Q12049 470 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B ERG27Q12452 347 aaKnown RBP0.52□□□□□ -2.33
snR39BsnR39B TMA17Q12513 150 aa0.52□□□□□ -2.33
snR39BsnR39B YGR161W-CQ3E744 92 aa0.52□□□□□ -2.33
snR39BsnR39B SPS22P25380 463 aa0.51□□□□□ -2.33
snR39BsnR39B CYS4P32582 507 aaKnown RBP0.51□□□□□ -2.33
snR39BsnR39B MTR2P34232 184 aaKnown RBP0.51□□□□□ -2.33
snR39BsnR39B STB6P36085 766 aa0.51□□□□□ -2.33
snR39BsnR39B YGP1P38616 354 aaKnown RBP0.51□□□□□ -2.33
snR39BsnR39B DIA4P38705 446 aaPredicted RBP0.51□□□□□ -2.33
snR39BsnR39B ELO1P39540 310 aa0.51□□□□□ -2.33
snR39BsnR39B DFG10P40526 253 aa0.51□□□□□ -2.33
snR39BsnR39B SLD5Q03406 294 aa0.51□□□□□ -2.33
snR39BsnR39B TRS130Q03660 1102 aa0.51□□□□□ -2.33
snR39BsnR39B IVY1Q04934 453 aa0.51□□□□□ -2.33
snR39BsnR39B ECM30Q06673 1274 aa0.51□□□□□ -2.33
snR39BsnR39B BRE1Q07457 700 aaKnown RBP0.51□□□□□ -2.33
snR39BsnR39B TEF1P02994 458 aaKnown RBP0.5□□□□□ -2.33
snR39BsnR39B APA1P16550 321 aaKnown RBP0.5□□□□□ -2.33
snR39BsnR39B OLE1P21147 510 aaKnown RBP0.5□□□□□ -2.33
snR39BsnR39B RAD16P31244 790 aa0.5□□□□□ -2.33
snR39BsnR39B MRPL10P36520 322 aa0.5□□□□□ -2.33
snR39BsnR39B UTP18P40362 594 aaPredicted RBP0.5□□□□□ -2.33
snR39BsnR39B PRM5P40476 318 aa0.5□□□□□ -2.33
snR39BsnR39B YJR154WP47181 346 aa0.5□□□□□ -2.33
snR39BsnR39B BUD32P53323 261 aa0.5□□□□□ -2.33
snR39BsnR39B DUG3P53871 357 aa0.5□□□□□ -2.33
snR39BsnR39B TMA16Q08687 178 aa0.5□□□□□ -2.33
snR39BsnR39B YOL114CQ12322 202 aa0.5□□□□□ -2.33
snR39BsnR39B PCD1Q12524 340 aa0.5□□□□□ -2.33
snR39BsnR39B TY2A-LR1P0C2J4 438 aa0.49□□□□□ -2.33
snR39BsnR39B RPS8AP0CX39 200 aaKnown RBP0.49□□□□□ -2.33
snR39BsnR39B RPS8BP0CX40 200 aaKnown RBP0.49□□□□□ -2.33
snR39BsnR39B TY2A-FP0CX61 438 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-GR2P0CX62 438 aa0.49□□□□□ -2.33
snR39BsnR39B SUI2P20459 304 aaKnown RBP0.49□□□□□ -2.33
snR39BsnR39B TY2A-CP25383 438 aa0.49□□□□□ -2.33
snR39BsnR39B UTR4P32626 227 aa0.49□□□□□ -2.33
snR39BsnR39B RSM22P36056 628 aa0.49□□□□□ -2.33
snR39BsnR39B MRPL36P36531 177 aa0.49□□□□□ -2.33
snR39BsnR39B MSG5P38590 489 aa0.49□□□□□ -2.33
snR39BsnR39B GCD10P41814 478 aa0.49□□□□□ -2.33
snR39BsnR39B RRT5P43607 289 aa0.49□□□□□ -2.33
snR39BsnR39B BRO1P48582 844 aa0.49□□□□□ -2.33
snR39BsnR39B ART5P53244 586 aaKnown RBP0.49□□□□□ -2.33
snR39BsnR39B CRH1P53301 507 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms