RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C PIK1P39104 1066 aa8.99□□□□□ -0.97
SEC61YLR378C RPS14BP39516 138 aaKnown RBP8.99□□□□□ -0.97
SEC61YLR378C SER33P40510 469 aa8.99□□□□□ -0.97
SEC61YLR378C TIS11P47977 285 aa8.99□□□□□ -0.97
SEC61YLR378C YNL260CP53846 198 aa8.99□□□□□ -0.97
SEC61YLR378C SPC2Q04969 178 aa8.99□□□□□ -0.97
SEC61YLR378C GGA1Q06336 557 aa8.99□□□□□ -0.97
SEC61YLR378C NSE1Q07913 336 aa8.99□□□□□ -0.97
SEC61YLR378C HUA2Q12134 243 aa8.99□□□□□ -0.97
SEC61YLR378C HIS5P07172 385 aa8.98□□□□□ -0.97
SEC61YLR378C MET8P15807 274 aa8.98□□□□□ -0.97
SEC61YLR378C YCK2P23292 546 aaKnown RBP8.98□□□□□ -0.97
SEC61YLR378C RSC6P25632 483 aa8.98□□□□□ -0.97
SEC61YLR378C IML3P38265 245 aa8.98□□□□□ -0.97
SEC61YLR378C GIC1P38785 314 aa8.98□□□□□ -0.97
SEC61YLR378C YHR078WP38799 552 aa8.98□□□□□ -0.97
SEC61YLR378C LSM5P40089 93 aaKnown RBP8.98□□□□□ -0.97
SEC61YLR378C YIL001WP40560 513 aa8.98□□□□□ -0.97
SEC61YLR378C GTO1P48239 356 aa8.98□□□□□ -0.97
SEC61YLR378C YPT32P51996 222 aaKnown RBP8.98□□□□□ -0.97
SEC61YLR378C CLU1Q03690 1277 aaKnown RBP8.98□□□□□ -0.97
SEC61YLR378C EMI1Q04406 187 aa8.98□□□□□ -0.97
SEC61YLR378C HSP31Q04432 237 aa8.98□□□□□ -0.97
SEC61YLR378C IOC2Q12072 812 aa8.98□□□□□ -0.97
SEC61YLR378C PHO5P00635 467 aa8.97□□□□□ -0.97
SEC61YLR378C SUC2P00724 532 aa8.97□□□□□ -0.97
SEC61YLR378C ATP2P00830 511 aaKnown RBP8.97□□□□□ -0.97
SEC61YLR378C ATP6P00854 259 aa8.97□□□□□ -0.97
SEC61YLR378C HXK2P04807 486 aaKnown RBP8.97□□□□□ -0.97
SEC61YLR378C SWI5P08153 709 aa8.97□□□□□ -0.97
SEC61YLR378C YKR104WP0CE69 306 aa8.97□□□□□ -0.97
SEC61YLR378C KEX2P13134 814 aa8.97□□□□□ -0.97
SEC61YLR378C CBF5P33322 483 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
SEC61YLR378C SDH3P33421 198 aa8.97□□□□□ -0.97
SEC61YLR378C YKL097CP34245 136 aa8.97□□□□□ -0.97
SEC61YLR378C GMH1P36125 273 aa8.97□□□□□ -0.97
SEC61YLR378C IMA5P40884 581 aa8.97□□□□□ -0.97
SEC61YLR378C SUM1P46676 1062 aa8.97□□□□□ -0.97
SEC61YLR378C ATH1P48016 1211 aa8.97□□□□□ -0.97
SEC61YLR378C MPS2P53159 387 aa8.97□□□□□ -0.97
SEC61YLR378C YGR016WP53209 190 aa8.97□□□□□ -0.97
SEC61YLR378C MMT1Q03218 510 aa8.97□□□□□ -0.97
SEC61YLR378C RAD34Q06665 692 aa8.97□□□□□ -0.97
SEC61YLR378C MUM3Q08750 479 aa8.97□□□□□ -0.97
SEC61YLR378C SLF1Q12034 447 aaKnown RBP8.97□□□□□ -0.97
SEC61YLR378C RAD59Q12223 238 aa8.97□□□□□ -0.97
SEC61YLR378C RRP42Q12277 265 aaPredicted RBP8.97□□□□□ -0.97
SEC61YLR378C SRN2Q99176 213 aa8.97□□□□□ -0.97
SEC61YLR378C HTA2P04912 132 aa8.97□□□□□ -0.97
SEC61YLR378C STE3P06783 470 aa8.97□□□□□ -0.97
SEC61YLR378C HOP09932 586 aa8.97□□□□□ -0.97
SEC61YLR378C PPZ1P26570 692 aa8.97□□□□□ -0.97
SEC61YLR378C RFA2P26754 273 aaKnown RBP8.97□□□□□ -0.97
SEC61YLR378C CIN8P27895 1000 aa8.97□□□□□ -0.97
SEC61YLR378C ATP11P32453 318 aa8.97□□□□□ -0.97
SEC61YLR378C IST2P38250 946 aa8.97□□□□□ -0.97
SEC61YLR378C BMT2P38278 337 aa8.97□□□□□ -0.97
SEC61YLR378C BEM4P39011 633 aa8.97□□□□□ -0.97
SEC61YLR378C GDH3P39708 457 aa8.97□□□□□ -0.97
SEC61YLR378C GIP4P39732 760 aa8.97□□□□□ -0.97
SEC61YLR378C FMP33P46998 180 aa8.97□□□□□ -0.97
SEC61YLR378C MDM34P53083 459 aa8.97□□□□□ -0.97
SEC61YLR378C GET1P53192 235 aa8.97□□□□□ -0.97
SEC61YLR378C ZRG17P53735 605 aa8.97□□□□□ -0.97
SEC61YLR378C YMR111CQ04461 462 aaPredicted RBP8.97□□□□□ -0.97
SEC61YLR378C PSR1Q07800 427 aa8.97□□□□□ -0.97
SEC61YLR378C ATG10Q07879 167 aa8.97□□□□□ -0.97
SEC61YLR378C DAP1Q12091 152 aa8.97□□□□□ -0.97
SEC61YLR378C PST1Q12355 444 aa8.97□□□□□ -0.97
SEC61YLR378C AI3P03877 415 aa8.96□□□□□ -0.98
SEC61YLR378C POL30P15873 258 aaKnown RBP8.96□□□□□ -0.98
SEC61YLR378C OCA4P25366 362 aa8.96□□□□□ -0.98
SEC61YLR378C FTH1P38310 465 aa8.96□□□□□ -0.98
SEC61YLR378C YJR142WP47173 342 aa8.96□□□□□ -0.98
SEC61YLR378C DAN4P47179 1161 aa8.96□□□□□ -0.98
SEC61YLR378C UPF3P48412 387 aaKnown RBP8.96□□□□□ -0.98
SEC61YLR378C DIA3P52290 468 aa8.96□□□□□ -0.98
SEC61YLR378C YGR015CP53208 328 aa8.96□□□□□ -0.98
SEC61YLR378C HST3P53687 447 aa8.96□□□□□ -0.98
SEC61YLR378C IRC15Q02733 499 aa8.96□□□□□ -0.98
SEC61YLR378C HOT1Q03213 719 aa8.96□□□□□ -0.98
SEC61YLR378C ECM11Q04110 302 aa8.96□□□□□ -0.98
SEC61YLR378C RPC11Q04307 110 aaPredicted RBP8.96□□□□□ -0.98
SEC61YLR378C YDR124WQ04608 324 aa8.96□□□□□ -0.98
SEC61YLR378C ARG7Q04728 441 aa8.96□□□□□ -0.98
SEC61YLR378C YPR084WQ06821 456 aa8.96□□□□□ -0.98
SEC61YLR378C YDR056CQ12025 205 aa8.96□□□□□ -0.98
SEC61YLR378C BRR1Q99177 341 aaPredicted RBP8.96□□□□□ -0.98
SEC61YLR378C GCD2P12754 651 aaPredicted RBP8.95□□□□□ -0.98
SEC61YLR378C MSS116P15424 664 aaKnown RBP8.95□□□□□ -0.98
SEC61YLR378C PHO81P17442 1178 aa8.95□□□□□ -0.98
SEC61YLR378C ERG6P25087 383 aaKnown RBP8.95□□□□□ -0.98
SEC61YLR378C RVS161P25343 265 aaKnown RBP8.95□□□□□ -0.98
SEC61YLR378C NGG1P32494 702 aa8.95□□□□□ -0.98
SEC61YLR378C YCR087C-AP37263 153 aa8.95□□□□□ -0.98
SEC61YLR378C CCT6P39079 546 aa8.95□□□□□ -0.98
SEC61YLR378C RIO2P40160 425 aaKnown RBP8.95□□□□□ -0.98
SEC61YLR378C AYR1P40471 297 aa8.95□□□□□ -0.98
SEC61YLR378C YJR149WP47177 404 aa8.95□□□□□ -0.98
SEC61YLR378C YNR061CP53747 219 aa8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms