RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TAB2Q9NYJ8 693 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.11■□□□□ 0.65
PHGDH-229ENST00000641891 V9GYY5 206 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-229ENST00000641891 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 AKR1B15C9JRZ8 316 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 FANCGO15287 622 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 ECE2O60344 883 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 STX10O60499 249 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 TDP2O95551 362 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 TXKP42681 527 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 RBM5P52756 815 aaKnown RBP eCLIP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 MTF1Q14872 753 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 FCHSD1Q86WN1 690 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 ADSSL1Q8N142 457 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 AK8Q96MA6 479 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 VPS16Q9H269 839 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 USP17L10C9JJH3 530 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 hCG_1984214I3L0E3 225 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 CCP110O43303 1012 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 FILIP1LQ4L180 1135 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 DACT2Q5SW24 774 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 ZNF713Q8N859 430 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 DESI2Q9BSY9 194 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 DNAI1Q9UI46 699 aa19.1■□□□□ 0.65
PHGDH-229ENST00000641891 ZNF646O15015 1829 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 GOLGB1Q14789 3259 aaKnown RBP19.1■□□□□ 0.65
PHGDH-229ENST00000641891 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 RAD21O60216 631 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 KCNB1Q14721 858 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 TCP11X2Q5H9J9 407 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 FAM198AQ9UFP1 575 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 PNMA6FA0A0J9YX94 578 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 SOWAHDA6NJG2 315 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 COPB1P53618 953 aaKnown RBP19.09■□□□□ 0.65
PHGDH-229ENST00000641891 ETF1P62495 437 aaKnown RBP19.09■□□□□ 0.65
PHGDH-229ENST00000641891 SH3BP5LQ7L8J4 393 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 PPFIBP1Q86W92 1011 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 MTMR9Q96QG7 549 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
PHGDH-229ENST00000641891 H0YIN7 160 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 N4BP3O15049 544 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 RHOBTB3O94955 611 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 TNNI2P48788 182 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 CALCRLQ16602 461 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 IRF2BP1Q8IU81 584 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 EHD4Q9H223 541 aa19.08■□□□□ 0.65
PHGDH-229ENST00000641891 ZSCAN12O43309 604 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 GYPCP04921 128 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 CASP14P31944 242 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 FXR1P51114 621 aaKnown RBP eCLIP19.08■□□□□ 0.646e-7■■■■□ 19.4
PHGDH-229ENST00000641891 SYCP1Q15431 976 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 AOC3Q16853 763 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 PDCL2Q8N4E4 241 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 PANX2Q96RD6 677 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 RIC8AQ9NPQ8 531 aa19.08■□□□□ 0.64
PHGDH-229ENST00000641891 MFAP3LO75121 409 aa19.07■□□□□ 0.64
PHGDH-229ENST00000641891 STYK1Q6J9G0 422 aa19.07■□□□□ 0.64
PHGDH-229ENST00000641891 ZSCAN29Q8IWY8 852 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-229ENST00000641891 GIMAP8Q8ND71 665 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-229ENST00000641891 TRIM9Q9C026 710 aa19.07■□□□□ 0.64
PHGDH-229ENST00000641891 LRRC10BA6NIK2 292 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 SLU7O95391 586 aaKnown RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 MYL1P05976 194 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 EEF2P13639 858 aaKnown RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 CUEDC2Q9H467 287 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 L2HGDHQ9H9P8 463 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 RNF225M0QZC1 329 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 ASIC1P78348 528 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 GRB10Q13322 594 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 GPATCH4Q5T3I0 446 aaKnown RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 ZNF772Q68DY9 489 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 RAD9BQ6WBX8 426 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 GJA10Q969M2 543 aa19.06■□□□□ 0.64
PHGDH-229ENST00000641891 TNS1Q9HBL0 1735 aaKnown RBP19.06■□□□□ 0.64
PHGDH-229ENST00000641891 ITIH6Q6UXX5 1313 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 PHLPP2Q6ZVD8 1323 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 POTEMA6NI47 508 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 ZBTB5O15062 677 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 CLK2P49760 499 aaKnown RBP19.05■□□□□ 0.64
PHGDH-229ENST00000641891 SPAG1Q07617 926 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 ORC2Q13416 577 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-229ENST00000641891 CERKLQ49MI3 558 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-229ENST00000641891 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 PPP1R18Q6NYC8 613 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 HPS3Q969F9 1004 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 CCDC17Q96LX7 622 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 MAGEF1Q9HAY2 307 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 LRWD1Q9UFC0 647 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 H7C1D1 291 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 FCER1AP12319 257 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 PDE4DQ08499 809 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 PPP4R3BQ5MIZ7 849 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 MTMR8Q96EF0 704 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 EEF2KMTQ96G04 330 aa19.05■□□□□ 0.64
PHGDH-229ENST00000641891 ERO1AQ96HE7 468 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms