RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 NUP133Q8WUM0 1156 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 MTA3Q9BTC8 594 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
PHGDH-227ENST00000641811 WDR19Q8NEZ3 1342 aa20.18■□□□□ 0.82
PHGDH-227ENST00000641811 HSPA4P34932 840 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-227ENST00000641811 EXOSC10Q01780 885 aaKnown RBP20.17■□□□□ 0.82
PHGDH-227ENST00000641811 BAATQ14032 418 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-227ENST00000641811 MAMDC4Q6UXC1 1216 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 RAB11FIP4Q86YS3 637 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 KCNB2Q92953 911 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 PAWRQ96IZ0 340 aaKnown RBP20.17■□□□□ 0.82
PHGDH-227ENST00000641811 SNX14Q9Y5W7 946 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 ASTN1O14525 1302 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 PFASO15067 1338 aa20.17■□□□□ 0.82
PHGDH-227ENST00000641811 CCDC69A6NI79 296 aa20.16■□□□□ 0.82
PHGDH-227ENST00000641811 SEPT4O43236 478 aa20.16■□□□□ 0.82
PHGDH-227ENST00000641811 ZNF865P0CJ78 1059 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-227ENST00000641811 CPA1P15085 419 aa20.16■□□□□ 0.82
PHGDH-227ENST00000641811 ZNF467Q7Z7K2 595 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-227ENST00000641811 SYNGAP1Q96PV0 1343 aa20.16■□□□□ 0.82
PHGDH-227ENST00000641811 PTPDC1A2A3K4 754 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 RXRAP19793 462 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 LIFRP42702 1097 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 KRT32Q14532 448 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 ARMCX2Q7L311 632 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 DHX32Q7L7V1 743 aaKnown RBP20.15■□□□□ 0.82
PHGDH-227ENST00000641811 FBXO11Q86XK2 927 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 CCDC144CPQ8IYA2 1237 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 TMTC2Q8N394 836 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 MSL3Q8N5Y2 521 aaKnown RBP20.15■□□□□ 0.82
PHGDH-227ENST00000641811 MTMR8Q96EF0 704 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-227ENST00000641811 PNMA2Q9UL42 364 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
PHGDH-227ENST00000641811 CYTH3O43739 400 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-227ENST00000641811 DDAH1O94760 285 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 CAPN2P17655 700 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 CALML3P27482 149 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 ANKLE1Q8NAG6 615 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 TBC1D5Q92609 795 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 JAKMIP1Q96N16 626 aaKnown RBP20.14■□□□□ 0.81
PHGDH-227ENST00000641811 PIGSQ96S52 555 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 RIOX1Q9H6W3 641 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 ZHX1Q9UKY1 873 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-227ENST00000641811 PDE4DIPQ5VU43 2346 aa20.14■□□□□ 0.81
PHGDH-227ENST00000641811 ABCB11O95342 1321 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 MSCO60682 206 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 CTCFLQ8NI51 663 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-227ENST00000641811 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 LENG1Q96BZ8 264 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-227ENST00000641811 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 LCTP09848 1927 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
PHGDH-227ENST00000641811 ZBTB5O15062 677 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 PLEKHA8P1O95397 391 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 RPS6P62753 249 aaKnown RBP20.12■□□□□ 0.81
PHGDH-227ENST00000641811 ACVR2BQ13705 512 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 NECAB2Q7Z6G3 386 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 SGMS1Q86VZ5 419 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
PHGDH-227ENST00000641811 AMNQ9BXJ7 453 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 MCM3APO60318 1980 aa20.12■□□□□ 0.81
PHGDH-227ENST00000641811 ASB14A6NK59 587 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-227ENST00000641811 KIF5BP33176 963 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 GJC2Q5T442 439 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-227ENST00000641811 KATNBL1Q9H079 304 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 ABHD16BQ9H3Z7 469 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 C11orf49Q9H6J7 331 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
PHGDH-227ENST00000641811 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
PHGDH-227ENST00000641811 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
PHGDH-227ENST00000641811 AKR1A1P14550 325 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 ALDH5A1P51649 535 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-227ENST00000641811 APOA5Q6Q788 366 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 MICU3Q86XE3 530 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 SRBD1Q8N5C6 995 aaKnown RBP20.1■□□□□ 0.81
PHGDH-227ENST00000641811 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 DPF3Q92784 378 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 FAM184BQ9ULE4 1060 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 MRPL11Q9Y3B7 192 aaKnown RBP20.1■□□□□ 0.81
PHGDH-227ENST00000641811 MYH6P13533 1939 aa20.1■□□□□ 0.81
PHGDH-227ENST00000641811 PNMA6FA0A0J9YX94 578 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 OPLAHO14841 1288 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 ADCY6O43306 1168 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 PGK1P00558 417 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 CALM1P0DP23 149 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 CALM2P0DP24 149 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 CALM3P0DP25 149 aa20.09■□□□□ 0.81
PHGDH-227ENST00000641811 RARBP10826 455 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms