RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 NR1I3Q14994 352 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 CDKAL1Q5VV42 579 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 TATDN1Q6P1N9 297 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 APTXQ7Z2E3 356 aaKnown RBP20.15■□□□□ 0.82
PHGDH-226ENST00000641756 ZNF592Q92610 1267 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 AK8Q96MA6 479 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 KANSL2Q9H9L4 492 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 A0A1B0GTH6 734 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 SLC1A4P43007 532 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 PTPN14Q15678 1187 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 PPP4R3BQ5MIZ7 849 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 PPP1R18Q6NYC8 613 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 SIAH1Q8IUQ4 282 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 NYAP2Q9P242 653 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 TEX33O43247 280 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 ICA1Q05084 483 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 PAK1Q13153 545 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 TBX2Q13207 712 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-226ENST00000641756 CALCRLQ16602 461 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 CEP135Q66GS9 1140 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 NYAP1Q6ZVC0 841 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 NELFBQ8WX92 580 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 MKL1Q969V6 931 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 KBTBD4Q9NVX7 518 aa20.14■□□□□ 0.81
PHGDH-226ENST00000641756 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
PHGDH-226ENST00000641756 PRCPP42785 496 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 ABCB5Q2M3G0 1257 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 KMT5BQ4FZB7 885 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 CUL5Q93034 780 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 KCND1Q9NSA2 647 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 RWDD2AQ9UIY3 292 aa20.13■□□□□ 0.81
PHGDH-226ENST00000641756 KLRC4O43908 158 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 RAD17O75943 681 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 JAG1P78504 1218 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 QRICH1Q2TAL8 776 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 MTMR9Q96QG7 549 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 MMTAG2Q9BU76 263 aaKnown RBP20.12■□□□□ 0.81
PHGDH-226ENST00000641756 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
PHGDH-226ENST00000641756 ADKP55263 362 aaKnown RBP20.12■□□□□ 0.81
PHGDH-226ENST00000641756 ORC2Q13416 577 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-226ENST00000641756 TMEM179Q6ZVK1 233 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 TTLL6Q8N841 843 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 IGSF22Q8N9C0 903 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 PPP1R13BQ96KQ4 1090 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 NUP88Q99567 741 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-226ENST00000641756 TMX1Q9H3N1 280 aa20.12■□□□□ 0.81
PHGDH-226ENST00000641756 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
PHGDH-226ENST00000641756 RRP1BQ14684 758 aaKnown RBP20.11■□□□□ 0.81
PHGDH-226ENST00000641756 DEFB132Q7Z7B7 95 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 CCDC112Q8NEF3 446 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 PSTPIP2Q9H939 334 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 TCP10L2B9ZVM9 353 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 ENTPD3O75355 529 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 SNAP25P60880 206 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 CSRNP1Q96S65 589 aa20.11■□□□□ 0.81
PHGDH-226ENST00000641756 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-226ENST00000641756 ADD3Q9UEY8 706 aaKnown RBP20.11■□□□□ 0.81
PHGDH-226ENST00000641756 ATRNL1Q5VV63 1379 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 TRIM49BA6NDI0 452 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 GH2P01242 217 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
PHGDH-226ENST00000641756 KCNB1Q14721 858 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 CDC37Q16543 378 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-226ENST00000641756 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 TMEM139Q8IV31 216 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 TC2NQ8N9U0 490 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 CUEDC2Q9H467 287 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 LRWD1Q9UFC0 647 aa20.1■□□□□ 0.81
PHGDH-226ENST00000641756 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L15C9J2P7 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L13C9JLJ4 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L11C9JVI0 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L18D6R9N7 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L22D6RA61 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L17D6RBQ6 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L19D6RCP7 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L20D6RJB6 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 F5H6K3 240 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 PSMD14O00487 310 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 CCT6AP40227 531 aaKnown RBP20.09■□□□□ 0.81
PHGDH-226ENST00000641756 KCNJ6P48051 423 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 KLRC3Q07444 240 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L24Q0WX57 530 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-226ENST00000641756 USP17L6PQ6QN14 398 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 ADSSL1Q8N142 457 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 LARGE2Q8N3Y3 721 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 CALML4Q96GE6 196 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 POTEMA6NI47 508 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 MYL1P05976 194 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 DPEP1P16444 411 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 KRT31Q15323 416 aa20.09■□□□□ 0.81
PHGDH-226ENST00000641756 GJA10Q969M2 543 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms