RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 VWA3AA6NCI4 1184 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 WDR46O15213 610 aaKnown RBP20.76■□□□□ 0.91
PHGDH-209ENST00000641074 CCDC192P0DO97 292 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-209ENST00000641074 SPP2Q13103 211 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 PRKG1Q13976 671 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 USP49Q70CQ1 688 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 TIGD1Q96MW7 591 aa20.76■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L15C9J2P7 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L13C9JLJ4 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L11C9JVI0 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L18D6R9N7 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L22D6RA61 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L17D6RBQ6 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L19D6RCP7 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L20D6RJB6 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 CCNT1O60563 726 aaKnown RBP20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP2O75604 605 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L24Q0WX57 530 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 ARL6IP4Q66PJ3 421 aaKnown RBP20.75■□□□□ 0.91
PHGDH-209ENST00000641074 USP17L6PQ6QN14 398 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 TMEM60Q9H2L4 133 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 EMILIN3Q9NT22 766 aa20.75■□□□□ 0.91
PHGDH-209ENST00000641074 EDIL3O43854 480 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 TYRO3Q06418 890 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 KRT26Q7Z3Y9 468 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 RNF214Q8ND24 703 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 ZNF280CQ8ND82 737 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■□□□ 13.6
PHGDH-209ENST00000641074 AS3MTQ9HBK9 375 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 ZHX2Q9Y6X8 837 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 MEIS2O14770 477 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 USP14P54578 494 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 BACE1P56817 501 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 LONRF3Q496Y0 759 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 NOL9Q5SY16 702 aaKnown RBP20.74■□□□□ 0.91
PHGDH-209ENST00000641074 CCDC174Q6PII3 467 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 SAMD1Q6SPF0 538 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-209ENST00000641074 EPSTI1Q96J88 318 aa20.74■□□□□ 0.91
PHGDH-209ENST00000641074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-209ENST00000641074 OPLAHO14841 1288 aa20.73■□□□□ 0.91
PHGDH-209ENST00000641074 VCAM1P19320 739 aa20.73■□□□□ 0.91
PHGDH-209ENST00000641074 SASS6Q6UVJ0 657 aa20.73■□□□□ 0.91
PHGDH-209ENST00000641074 ZC3H15Q8WU90 426 aaKnown RBP20.73■□□□□ 0.91
PHGDH-209ENST00000641074 SYMPKQ92797 1274 aaKnown RBP20.73■□□□□ 0.91
PHGDH-209ENST00000641074 ERCC4Q92889 916 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-209ENST00000641074 PANK2Q9BZ23 570 aa20.73■□□□□ 0.91
PHGDH-209ENST00000641074 LAD1O00515 517 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 POLR2DO15514 142 aaKnown RBP20.72■□□□□ 0.91
PHGDH-209ENST00000641074 TRAF1Q13077 416 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 NEMFO60524 1076 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 ORC2Q13416 577 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-209ENST00000641074 DTHD1Q6ZMT9 781 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 KRBA2Q6ZNG9 492 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 PRPF38AQ8NAV1 312 aaKnown RBP20.72■□□□□ 0.91
PHGDH-209ENST00000641074 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
PHGDH-209ENST00000641074 PHIPQ8WWQ0 1821 aa20.71■□□□□ 0.91
PHGDH-209ENST00000641074 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
PHGDH-209ENST00000641074 PRPHP41219 470 aa20.71■□□□□ 0.91
PHGDH-209ENST00000641074 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-209ENST00000641074 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
PHGDH-209ENST00000641074 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
PHGDH-209ENST00000641074 TAF1DQ9H5J8 278 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-209ENST00000641074 RPAP3Q9H6T3 665 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-209ENST00000641074 POTECB2RU33 542 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 TDP2O95551 362 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 OR52Z1P0C646 297 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 LONP1P36776 959 aaKnown RBP20.7■□□□□ 0.9
PHGDH-209ENST00000641074 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 AP3B2Q13367 1082 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 PDILTQ8N807 584 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 CNNM3Q8NE01 707 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 KIAA1468Q9P260 1216 aa20.7■□□□□ 0.9
PHGDH-209ENST00000641074 A0A087X0B3 334 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 PPP1R12BO60237 982 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-209ENST00000641074 VGLL4Q14135 290 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 ANO3Q9BYT9 981 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 SNCAIPQ9Y6H5 919 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 SCN4AP35499 1836 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 IQCA1LA6NCM1 817 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 C19orf81C9J6K1 198 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 FLOT1O75955 427 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 HMGCS2P54868 508 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 EAPPQ56P03 285 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-209ENST00000641074 MCTP2Q6DN12 878 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 PPP4R3AQ6IN85 833 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 LDHDQ86WU2 507 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 CDCA5Q96FF9 252 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 C12orf42Q96LP6 360 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 SERTAD1Q9UHV2 236 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 AFG3L2Q9Y4W6 797 aa20.69■□□□□ 0.9
PHGDH-209ENST00000641074 MYH7BA7E2Y1 1941 aa20.68■□□□□ 0.9
PHGDH-209ENST00000641074 ZNF536O15090 1300 aa20.68■□□□□ 0.9
PHGDH-209ENST00000641074 PIK3CDO00329 1044 aa20.68■□□□□ 0.9
PHGDH-209ENST00000641074 SLC37A4O43826 429 aa20.68■□□□□ 0.9
PHGDH-209ENST00000641074 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-209ENST00000641074 ANO6Q4KMQ2 910 aa20.68■□□□□ 0.9
PHGDH-209ENST00000641074 ELOA2Q8IYF1 753 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-209ENST00000641074 PPP1R9AQ9ULJ8 1098 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms