RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 KIF3BO15066 747 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 BCRP11274 1271 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 HOXC12P31275 282 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 ECI1P42126 302 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 TMPRSS15P98073 1019 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 NBPF9Q3BBW0 867 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 USP53Q70EK8 1073 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 UBE2R2Q712K3 238 aaPredicted RBP8.78□□□□□ -1
SCARB2-224ENST00000640880 SPATS2Q86XZ4 545 aaKnown RBP8.78□□□□□ -1
SCARB2-224ENST00000640880 SYTL5Q8TDW5 730 aaPredicted RBP8.78□□□□□ -1
SCARB2-224ENST00000640880 MORC4Q8TE76 937 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 RNF141Q8WVD5 230 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 PMM1Q92871 262 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 CCDC140Q96MF4 163 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 ZDHHC15Q96MV8 337 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 TTC1Q99614 292 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 DIS3Q9Y2L1 958 aaKnown RBP8.78□□□□□ -1
SCARB2-224ENST00000640880 TRAF6Q9Y4K3 522 aa8.78□□□□□ -1
SCARB2-224ENST00000640880 TEX14Q8IWB6 1497 aa8.77□□□□□ -1
SCARB2-224ENST00000640880 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1
SCARB2-224ENST00000640880 AKAP10O43572 662 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 ETV3P41162 512 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 DGKGP49619 791 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 GRB10Q13322 594 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-224ENST00000640880 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.77□□□□□ -1.01
SCARB2-224ENST00000640880 PI4K2BQ8TCG2 481 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 PRDM14Q9GZV8 571 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 ZIM2Q9NZV7 527 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 GPR55Q9Y2T6 319 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-224ENST00000640880 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1.01
SCARB2-224ENST00000640880 ABCA9Q8IUA7 1624 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 B4E1Z4 1266 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 NEMP1O14524 444 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 CRTAMO95727 393 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 RAB6AP20340 208 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 GNALP38405 381 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 AMPD2Q01433 879 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 SNW1Q13573 536 aaKnown RBP8.76□□□□□ -1.01
SCARB2-224ENST00000640880 SLC35F1Q5T1Q4 408 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 PIK3R6Q5UE93 754 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 CCSAPQ6IQ19 270 aaPredicted RBP8.76□□□□□ -1.01
SCARB2-224ENST00000640880 OR2W6PQ8NHA6 318 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 COG1Q8WTW3 980 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 FBXL18Q96ME1 805 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 YIPF4Q9BSR8 244 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 PUS7LQ9H0K6 701 aaKnown RBP8.76□□□□□ -1.01
SCARB2-224ENST00000640880 IFT22Q9H7X7 185 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCARB2-224ENST00000640880 GFOD1Q9NXC2 390 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
SCARB2-224ENST00000640880 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 VAMP4O75379 141 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 SLITRK5O94991 958 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 CPP00450 1065 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 APPP05067 770 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 SCG5P05408 212 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 ATF3P18847 181 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 ID4P47928 161 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 RHBDL3P58872 404 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 ANKRD34AQ69YU3 496 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 ZCCHC8Q6NZY4 707 aaKnown RBP8.75□□□□□ -1.01
SCARB2-224ENST00000640880 CHPFQ8IZ52 775 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 DSCC1Q9BVC3 393 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 TRIM8Q9BZR9 551 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
SCARB2-224ENST00000640880 CYP26B1Q9NR63 512 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 AASDHPPTQ9NRN7 309 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 PCDHA9Q9Y5H5 950 aa8.75□□□□□ -1.01
SCARB2-224ENST00000640880 MTUS2Q5JR59 1369 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 SUPT6HQ7KZ85 1726 aaKnown RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 TROQ12816 1431 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 CD109Q6YHK3 1445 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 KDM6BO15054 1643 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 BPIP17213 487 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 SCNN1BP51168 640 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 PIN1Q13526 163 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 DPY19L1Q2PZI1 675 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 SKOR2Q2VWA4 1001 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 MAP9Q49MG5 647 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 ZBTB46Q86UZ6 589 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 MYO1HQ8N1T3 1032 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 AGGF1Q8N302 714 aaeCLIP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 CNTD1Q8N815 330 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 WNK4Q96J92 1243 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 TRHDEQ9UKU6 1024 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 SF3B6Q9Y3B4 125 aaKnown RBP8.74□□□□□ -1.01
SCARB2-224ENST00000640880 DAGLAQ9Y4D2 1042 aa8.74□□□□□ -1.01
SCARB2-224ENST00000640880 TIAM1Q13009 1591 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 ITSN2Q9NZM3 1697 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 AQP7O14520 342 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 ZEB2O60315 1214 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 LRRN2O75325 713 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 APBA3O96018 575 aa8.73□□□□□ -1.01
SCARB2-224ENST00000640880 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms