RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 SEMA3EO15041 775 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 POLR2DO15514 142 aaKnown RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 FAM107AO95990 144 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 CYP2E1P05181 493 aaPredicted RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ARPC4P59998 168 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ARHGEF18Q6ZSZ5 1173 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 HS2ST1Q7LGA3 356 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 RSPH3Q86UC2 560 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM74Q86UV6 250 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 TRIM73Q86UV7 250 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 VPS16Q9H269 839 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 HELLSQ9NRZ9 838 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 MCM8Q9UJA3 840 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ATP7AQ04656 1500 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ATP10AO60312 1499 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 EYA2O00167 538 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 MAPK13O15264 365 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 SERPINI2O75830 405 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ZWINTO95229 277 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 EIF4A1P60842 406 aaKnown RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 IL9RQ01113 521 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 TRMT44Q8IYL2 757 aaKnown RBP9.04□□□□□ -0.96
NECAP1-227ENST00000640648 LRRC8CQ8TDW0 803 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 DDI1Q8WTU0 396 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 SAMM50Q9Y512 469 aa9.04□□□□□ -0.96
NECAP1-227ENST00000640648 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 TBC1D12O60347 775 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 POLR2EP19388 210 aaKnown RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 STX2P32856 288 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ZNF174Q15697 407 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 OR8K1Q8NGG5 319 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 KCNK9Q9NPC2 374 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 CNGB3Q9NQW8 809 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 NFE2L3Q9Y4A8 694 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 EXOC5O00471 708 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 AREL1O15033 823 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ZPR1O75312 459 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 MBD4O95243 580 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ERCC5P28715 1186 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 PHEXP78562 749 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 TTC1Q99614 292 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 DMAP1Q9NPF5 467 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 CCDC87Q9NVE4 849 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ATXN10Q9UBB4 475 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 UGGT1Q9NYU2 1555 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 GPAA1O43292 621 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 GNAT1P11488 350 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 HSPA6P17066 643 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 IRAK1P51617 712 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 CCDC84Q86UT8 332 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 TUBA1BP68363 451 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 GCKRQ14397 625 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 TUBA1AQ71U36 451 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
NECAP1-227ENST00000640648 STAMQ92783 540 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 JAG2Q9Y219 1238 aa9.03□□□□□ -0.96
NECAP1-227ENST00000640648 FAM200BP0CF97 657 aa9.02□□□□□ -0.96
NECAP1-227ENST00000640648 MTX1Q13505 466 aa9.02□□□□□ -0.96
NECAP1-227ENST00000640648 CCDC153Q494R4 210 aa9.02□□□□□ -0.96
NECAP1-227ENST00000640648 EXOC8Q8IYI6 725 aa9.02□□□□□ -0.96
NECAP1-227ENST00000640648 CRNKL1Q9BZJ0 848 aaKnown RBP9.02□□□□□ -0.96
NECAP1-227ENST00000640648 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.96
NECAP1-227ENST00000640648 RPL26L1Q9UNX3 145 aaKnown RBP9.02□□□□□ -0.96
NECAP1-227ENST00000640648 PDXDC1Q6P996 788 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 TSHZ1Q6ZSZ6 1077 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 LSG1Q9H089 658 aaKnown RBP9.02□□□□□ -0.97
NECAP1-227ENST00000640648 TMEM60Q9H2L4 133 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 SH2D4AQ9H788 454 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 ANGEL1Q9UNK9 670 aaKnown RBP9.02□□□□□ -0.97
NECAP1-227ENST00000640648 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 TACC3Q9Y6A5 838 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 SLC4A7Q9Y6M7 1214 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 TBKBP1A7MCY6 615 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 IRS4O14654 1257 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-227ENST00000640648 CCDC166P0CW27 439 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 OCA2Q04671 838 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 KRR1Q13601 381 aaKnown RBP9.02□□□□□ -0.97
NECAP1-227ENST00000640648 ITIH4Q14624 930 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 SPATA1Q5VX52 437 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 PASD1Q8IV76 773 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 MSANTD4Q8NCY6 345 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 CCDC138Q96M89 665 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 GORASP1Q9BQQ3 440 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 E7EWF7 191 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 PFKFB2O60825 505 aa9.02□□□□□ -0.97
NECAP1-227ENST00000640648 FESP07332 822 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms