RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 FAM107BQ9H098 131 aa11.82□□□□□ -0.52
SLC35A3-220ENST00000640360 LUC7L2Q9Y383 392 aaKnown RBP11.82□□□□□ -0.52
SLC35A3-220ENST00000640360 NUP188Q5SRE5 1749 aa11.82□□□□□ -0.52
SLC35A3-220ENST00000640360 CHD4Q14839 1912 aa11.82□□□□□ -0.52
SLC35A3-220ENST00000640360 SMCO2A6NFE2 343 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 GFPT1Q06210 699 aaPredicted RBP11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 CASP8Q14790 479 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 CENPHQ9H3R5 247 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 UBXN2AP68543 259 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 NT5DC1Q5TFE4 455 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 SH3RF1Q7Z6J0 888 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 MAD2L2Q9UI95 211 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 MYO6Q9UM54 1294 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 ZNF804BA4D1E1 1349 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 ECM29Q5VYK3 1845 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L15C9J2P7 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L13C9JLJ4 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L11C9JVI0 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L18D6R9N7 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L22D6RA61 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L17D6RBQ6 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L19D6RCP7 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L20D6RJB6 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
SLC35A3-220ENST00000640360 CTAGE15A4D2H0 777 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 CTAGE8P0CG41 777 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 PBX1P40424 430 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 CTAGE6Q86UF2 777 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 CTAGE4Q8IX94 777 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 GPR161Q8N6U8 529 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 ATP1A2P50993 1020 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 RRAGAQ7L523 313 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 NAPGQ99747 312 aaPredicted RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 FAM204AQ9H8W3 233 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 FAM237AA0A1B0GTK4 181 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 FTCDO95954 541 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 CNOT6LQ96LI5 555 aaKnown RBP11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 SAMM50Q9Y512 469 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 RASSF7Q02833 373 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 FAM182AQ5T1J6 154 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 NGLY1Q96IV0 654 aa11.8□□□□□ -0.52
SLC35A3-220ENST00000640360 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 MB21D1Q8N884 522 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 PACSIN1Q9BY11 444 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 MARCH6O60337 910 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 LDHBP07195 334 aaKnown RBP11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 CABP7Q86V35 215 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 IFT81Q8WYA0 676 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 DACH1Q9UI36 760 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 ZBTB39O15060 712 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 KLRC4O43908 158 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 ACTN1P12814 892 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 GNAT2P19087 354 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 TDRD12Q587J7 1177 aaKnown RBP11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 TAF3Q5VWG9 929 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 SPICE1Q8N0Z3 855 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 TMTC2Q8N394 836 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 JAKMIP2Q96AA8 810 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 SEMA6BQ9H3T3 888 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 SMCHD1A6NHR9 2005 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
SLC35A3-220ENST00000640360 LAMB4A4D0S4 1761 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 ERCC5P28715 1186 aaPredicted RBP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 BTDP43251 543 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 ADAMTSL3P82987 1691 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 GGCXP38435 758 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 GTF2IP78347 998 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 PLS1Q14651 629 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 MAEAQ7L5Y9 396 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 FAM84AQ96KN4 292 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms