RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 LRP6O75581 1613 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CTAGE15A4D2H0 777 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 WNT7AO00755 349 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CFBP00751 764 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CTAGE8P0CG41 777 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 RCSD1Q6JBY9 416 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CTAGE6Q86UF2 777 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 KRT222Q8N1A0 295 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 AK8Q96MA6 479 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 SEPT11Q9NVA2 429 aaKnown RBP8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 ADAMTS7Q9UKP4 1686 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 TDP2O95551 362 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 CD44P16070 742 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 MATR3P43243 847 aaKnown RBP eCLIP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 KRT83P78385 493 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 CACNB1Q02641 598 aaPredicted RBP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 MTF1Q14872 753 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 SYCP1Q15431 976 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 ABCB5Q2M3G0 1257 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 CCDC174Q6PII3 467 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 FLAD1Q8NFF5 587 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 NEK11Q8NG66 645 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 OR8K1Q8NGG5 319 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 LARP4BQ92615 738 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 CNOT6LQ96LI5 555 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 TUBGCP2Q9BSJ2 902 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 NAA15Q9BXJ9 866 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 SAMM50Q9Y512 469 aa8.65□□□□□ -1.03
HNRNPU-223ENST00000640001 FAM193AP78312 1265 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 KIF5AQ12840 1032 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 TCP11X2Q5H9J9 407 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 SPZ1Q9BXG8 430 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 MTMR4Q9NYA4 1195 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 ERICH4A6NGS2 130 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L15C9J2P7 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L13C9JLJ4 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L11C9JVI0 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L18D6R9N7 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L22D6RA61 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L17D6RBQ6 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L19D6RCP7 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L20D6RJB6 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 KRT86O43790 486 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 BMP6P22004 513 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 PPP1R2P41236 205 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L24Q0WX57 530 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 USP17L6PQ6QN14 398 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 P2RX5Q93086 422 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 ACBD3Q9H3P7 528 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 PDS5AQ29RF7 1337 aaKnown RBP8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 PNMA6FA0A0J9YX94 578 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 TM4SF1P30408 202 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 NT5C2P49902 561 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 DDR1Q08345 913 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 DLGAP5Q15398 846 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 GPBP1Q86WP2 473 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 HPS3Q969F9 1004 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 CSRNP1Q96S65 589 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 NAPGQ99747 312 aaPredicted RBP8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 GTPBP4Q9BZE4 634 aaKnown RBP8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 TDRD3Q9H7E2 651 aaKnown RBP8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 ARFGAP3Q9NP61 516 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 KIAA1024Q9UPX6 916 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 SPEF2Q9C093 1822 aa8.64□□□□□ -1.03
HNRNPU-223ENST00000640001 MFAP3LO75121 409 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 RAD17O75943 681 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CHRNA5P30532 468 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 DNM2P50570 870 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 FUT2Q10981 343 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 SEPT2Q15019 361 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 FBXO11Q86XK2 927 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 ADGRF4Q8IZF3 695 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CEP112Q8N8E3 955 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 SPAG5Q96R06 1193 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CUEDC2Q9H467 287 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 KANSL2Q9H9L4 492 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 PI4KBQ9UBF8 816 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 PPP1R12BO60237 982 aaPredicted RBP8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 PDHBP11177 359 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CYP4A11Q02928 519 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CT47A1Q5JQC4 288 aaPredicted RBP8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 NAP1L4Q99733 375 aaKnown RBP8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 EHMT1Q9H9B1 1298 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 NLRC4Q9NPP4 1024 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 PLS1Q14651 629 aa8.63□□□□□ -1.03
HNRNPU-223ENST00000640001 TNIP1Q15025 636 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms