RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 TMEM39BQ9GZU3 492 aa11.66□□□□□ -0.54
PAX6-236ENST00000638685 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
PAX6-236ENST00000638685 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 ENTPD3O75355 529 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 TAL1P17542 331 aaPredicted RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 SMARCA1P28370 1054 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 DLGAP5Q15398 846 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 CCDC96Q2M329 555 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 SH3RF1Q7Z6J0 888 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 NIM1KQ8IY84 436 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 CCDC148Q8NFR7 591 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 STAMQ92783 540 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 DPF2Q92785 391 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 DHX58Q96C10 678 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 CGNQ9P2M7 1197 aaKnown RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 SEC63Q9UGP8 760 aaKnown RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 SNAP25P60880 206 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 ICA1Q05084 483 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 FAM177A1Q8N128 213 aaPredicted RBP11.65□□□□□ -0.54
PAX6-236ENST00000638685 IQUBQ8NA54 791 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 MKL1Q969V6 931 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
PAX6-236ENST00000638685 WNT10BO00744 389 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 ARHGAP6O43182 974 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 ECE1P42892 770 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 RASSF7Q02833 373 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 GRIPAP1Q4V328 841 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
PAX6-236ENST00000638685 LRRC15Q8TF66 581 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 MTRQ99707 1265 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 TAOK3Q9H2K8 898 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 GOLGA6L9A6NEM1 432 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 AFMP43652 599 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
PAX6-236ENST00000638685 UBE2SQ16763 222 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 FEZ1Q99689 392 aa11.64□□□□□ -0.55
PAX6-236ENST00000638685 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 F5H6K3 240 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 STX10O60499 249 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 POLD1P28340 1107 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 PTGER2P43116 358 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
PAX6-236ENST00000638685 KLRC3Q07444 240 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 E2F4Q16254 413 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 LETM2Q2VYF4 491 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 GALNT17Q6IS24 598 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 TMEM179Q6ZVK1 233 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 TBCKQ8TEA7 893 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 ZBED3Q96IU2 234 aaPredicted RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 L2HGDHQ9H9P8 463 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.63□□□□□ -0.55
PAX6-236ENST00000638685 PGAP2Q9UHJ9 254 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 NDUFB10O96000 172 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 SLC1A4P43007 532 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 ETF1P62495 437 aaKnown RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 DPYDQ12882 1025 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 FAM151AQ8WW52 585 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 MED15Q96RN5 788 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 BAG1Q99933 345 aaPredicted RBP11.63□□□□□ -0.55
PAX6-236ENST00000638685 C6orf50Q9HD87 102 aa11.63□□□□□ -0.55
PAX6-236ENST00000638685 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
PAX6-236ENST00000638685 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 CCNT1O60563 726 aaKnown RBP11.62□□□□□ -0.55
PAX6-236ENST00000638685 LONP1P36776 959 aaKnown RBP11.62□□□□□ -0.55
PAX6-236ENST00000638685 TXLNAP40222 546 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 GPATCH4Q5T3I0 446 aaKnown RBP11.62□□□□□ -0.55
PAX6-236ENST00000638685 CIAPIN1Q6FI81 312 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
PAX6-236ENST00000638685 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms