RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 DOCK1Q14185 1865 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 BTBD18B2RXH4 712 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 ZNF543Q08ER8 600 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 NOSTRINQ8IVI9 506 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC02001-202ENST00000638682 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
LINC02001-202ENST00000638682 FOXN1O15353 648 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 KRT2P35908 639 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 VGLL4Q14135 290 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
LINC02001-202ENST00000638682 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
LINC02001-202ENST00000638682 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
LINC02001-202ENST00000638682 WNK4Q96J92 1243 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 ADAM33Q9BZ11 813 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 UBA5Q9GZZ9 404 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 ZBTB21Q9ULJ3 1066 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
LINC02001-202ENST00000638682 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 RAD21O60216 631 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.35
LINC02001-202ENST00000638682 NLRP5P59047 1200 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 NR5A1Q13285 461 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 STK38Q15208 465 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.35
LINC02001-202ENST00000638682 SPRYD7Q5W111 196 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 ANO1Q5XXA6 986 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 SLFN13Q68D06 897 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.35
LINC02001-202ENST00000638682 RIOX1Q9H6W3 641 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.35
LINC02001-202ENST00000638682 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.35
LINC02001-202ENST00000638682 STXBP3O00186 592 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 CA12O43570 354 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 YEATS4O95619 227 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
LINC02001-202ENST00000638682 CALML3P27482 149 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 CAP2P40123 477 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 NASPP49321 788 aaPredicted RBP12.83□□□□□ -0.36
LINC02001-202ENST00000638682 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 HOMER1Q86YM7 354 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
LINC02001-202ENST00000638682 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 PIGSQ96S52 555 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 ARHGEF10LQ9HCE6 1279 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 TMEM63CQ9P1W3 806 aa12.83□□□□□ -0.36
LINC02001-202ENST00000638682 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
LINC02001-202ENST00000638682 F5H6K3 240 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 INPP5BP32019 993 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 SLC1A4P43007 532 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 KLRC3Q07444 240 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 NPY5RQ15761 445 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 TTBK2Q6IQ55 1244 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 FAM177A1Q8N128 213 aaPredicted RBP12.82□□□□□ -0.36
LINC02001-202ENST00000638682 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 SYNPO2Q9UMS6 1093 aa12.82□□□□□ -0.36
LINC02001-202ENST00000638682 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 PHF20L1A8MW92 1017 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 NDUFB10O96000 172 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
LINC02001-202ENST00000638682 ME1P48163 572 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 SF3A1Q15459 793 aaKnown RBP12.81□□□□□ -0.36
LINC02001-202ENST00000638682 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 BICD2Q8TD16 824 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
LINC02001-202ENST00000638682 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
LINC02001-202ENST00000638682 JMJD4Q9H9V9 463 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 SNCAIPQ9Y6H5 919 aa12.81□□□□□ -0.36
LINC02001-202ENST00000638682 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
LINC02001-202ENST00000638682 SPTLC2O15270 562 aa12.8□□□□□ -0.36
LINC02001-202ENST00000638682 ASNSP08243 561 aa12.8□□□□□ -0.36
LINC02001-202ENST00000638682 SLC16A2P36021 539 aa12.8□□□□□ -0.36
LINC02001-202ENST00000638682 GJA5P36382 358 aa12.8□□□□□ -0.36
LINC02001-202ENST00000638682 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
LINC02001-202ENST00000638682 NAPAP54920 295 aa12.8□□□□□ -0.36
LINC02001-202ENST00000638682 RILPL1Q5EBL4 403 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms