RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SUN1O94901 812 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 ZBED4O75132 1171 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 CYP21A2P08686 494 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 GABPAQ06546 454 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 STAM2O75886 525 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 GALNT17Q6IS24 598 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 SLFN12Q8IYM2 578 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 IWS1Q96ST2 819 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 N4BP1O75113 896 aaKnown RBP20.23■□□□□ 0.83
SCARB2-213ENST00000638680 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
SCARB2-213ENST00000638680 EXOC3L4Q17RC7 722 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 FOXP1Q9H334 677 aaPredicted RBP20.23■□□□□ 0.83
SCARB2-213ENST00000638680 ADGRL2O95490 1459 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 GYG1P46976 350 aa20.23■□□□□ 0.83
SCARB2-213ENST00000638680 METTL14Q9HCE5 456 aaKnown RBP20.23■□□□□ 0.83
SCARB2-213ENST00000638680 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
SCARB2-213ENST00000638680 KAZNQ674X7 775 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 M0R2C6 588 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
SCARB2-213ENST00000638680 E2F5Q15329 346 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 SCYL2Q6P3W7 929 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 KDM5DQ9BY66 1539 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 RPAINQ86UA6 219 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 PPM1KQ8N3J5 372 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 LINC00301Q8NCQ3 95 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 MYOM2P54296 1465 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 EEF1GP26641 437 aaKnown RBP20.22■□□□□ 0.83
SCARB2-213ENST00000638680 HADHQ16836 314 aaKnown RBP20.22■□□□□ 0.83
SCARB2-213ENST00000638680 OTUD6AQ7L8S5 288 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 SPTLC3Q9NUV7 552 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 USH1CQ9Y6N9 552 aa20.22■□□□□ 0.83
SCARB2-213ENST00000638680 ZMYM1Q5SVZ6 1142 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 FAM178BQ8IXR5 827 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 ORAI2Q96SN7 254 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 DBNLQ9UJU6 430 aaKnown RBP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 KAT6BQ8WYB5 2073 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 CXCR5P32302 372 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 FBXO38Q6PIJ6 1188 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 TTLL7Q6ZT98 887 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 VSTM4Q8IW00 320 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 BBOF1Q8ND07 529 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 SAMSN1Q9NSI8 373 aaKnown RBP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 POC1B-GALNT4F8VUJ3 575 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 LARGE1O95461 756 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 DEPTORQ8TB45 409 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 TRIM37O94972 964 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 MOCS3O95396 460 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 IL9RQ01113 521 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 SATB1Q01826 763 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
SCARB2-213ENST00000638680 BFSP1Q12934 665 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 ZNF148Q9UQR1 794 aa20.21■□□□□ 0.83
SCARB2-213ENST00000638680 MAGI2Q86UL8 1455 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 EXOC4Q96A65 974 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 COL4A3BPQ9Y5P4 624 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 CCDC151A5D8V7 595 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 MESDQ14696 234 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 USP40Q9NVE5 1235 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
SCARB2-213ENST00000638680 A0A087WUV0 522 aaPredicted RBP20.2■□□□□ 0.82
SCARB2-213ENST00000638680 COG7P83436 770 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 Q9H521 79 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 P4HA1P13674 534 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 SERPINB6P35237 376 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 APOA5Q6Q788 366 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 P2RX5Q93086 422 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 GJA10Q969M2 543 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 VCX3AQ9NNX9 186 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 TRPC6Q9Y210 931 aa20.2■□□□□ 0.82
SCARB2-213ENST00000638680 BZW2Q9Y6E2 419 aaKnown RBP20.2■□□□□ 0.82
SCARB2-213ENST00000638680 LRRD1A4D1F6 860 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 ADORA1P30542 326 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 ADCY1Q08828 1119 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 NNTQ13423 1086 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 NLRX1Q86UT6 975 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
SCARB2-213ENST00000638680 TRIM4Q9C037 500 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 ATP8A1Q9Y2Q0 1164 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 RPS6KA2Q15349 733 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-213ENST00000638680 RASIP1Q5U651 963 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
SCARB2-213ENST00000638680 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 DLATP10515 647 aaKnown RBP20.19■□□□□ 0.82
SCARB2-213ENST00000638680 LIG4P49917 911 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 GRM1Q13255 1194 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 RUNDC3BQ96NL0 473 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 GJA3Q9Y6H8 435 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 LMNB1P20700 586 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms