RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 SPDYE3A6NKU9 549 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 CUTAO60888 179 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
LINC00598-216ENST00000638163 USP11P51784 963 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 GTF2A2P52657 109 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 HMGCS2P54868 508 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 NR5A1Q13285 461 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
LINC00598-216ENST00000638163 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 CATSPERGQ6ZRH7 1159 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 PIK3AP1Q6ZUJ8 805 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
LINC00598-216ENST00000638163 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.53
LINC00598-216ENST00000638163 FBXO40Q9UH90 709 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 ADAMTS5Q9UNA0 930 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 SCAF8Q9UPN6 1271 aaKnown RBP11.77□□□□□ -0.53
LINC00598-216ENST00000638163 AGTPBP1Q9UPW5 1226 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 STK24Q9Y6E0 443 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 MYH15Q9Y2K3 1946 aa11.77□□□□□ -0.53
LINC00598-216ENST00000638163 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
LINC00598-216ENST00000638163 SLC26A4O43511 780 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 CETPP11597 493 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 HSPA6P17066 643 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 OSBPP22059 807 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 DSG3P32926 999 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 MAP1SQ66K74 1059 aaPredicted RBP11.76□□□□□ -0.53
LINC00598-216ENST00000638163 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 ZCCHC17Q9NP64 241 aaKnown RBP11.76□□□□□ -0.53
LINC00598-216ENST00000638163 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
LINC00598-216ENST00000638163 HOOK1Q9UJC3 728 aaKnown RBP11.76□□□□□ -0.53
LINC00598-216ENST00000638163 CCPG1Q9ULG6 757 aa11.76□□□□□ -0.53
LINC00598-216ENST00000638163 UBE2Q2LH0YL09 131 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 VWA5AO00534 786 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 IRF6O14896 467 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 CTAGE5O15320 804 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 CMA1P23946 247 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 TXLNAP40222 546 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 IRX3P78415 501 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 ATP2C1P98194 919 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 NBR1Q14596 966 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 PTPAQ15257 358 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 COA7Q96BR5 231 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 OPTNQ96CV9 577 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 AK8Q96MA6 479 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 USP25Q9UHP3 1055 aa11.75□□□□□ -0.53
LINC00598-216ENST00000638163 SRPRBQ9Y5M8 271 aaKnown RBP11.75□□□□□ -0.53
LINC00598-216ENST00000638163 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 FAM237AA0A1B0GTK4 181 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 TBX3O15119 743 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 NEMFO60524 1076 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
LINC00598-216ENST00000638163 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
LINC00598-216ENST00000638163 PTPREP23469 700 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
LINC00598-216ENST00000638163 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
LINC00598-216ENST00000638163 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 PRKG1Q13976 671 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 CCDC183Q5T5S1 534 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 XRRA1Q6P2D8 792 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
LINC00598-216ENST00000638163 CHST13Q8NET6 341 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 HHIPL1Q96JK4 782 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 CLIC4Q9Y696 253 aa11.74□□□□□ -0.53
LINC00598-216ENST00000638163 CYP3A7-CYP3A51PA0A087WV96 503 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 LOC102724159A0A0B4J2E5 919 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 B4DLN1 442 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 PFASO15067 1338 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 KINO60870 393 aaKnown RBP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 SLC25A27O95847 323 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 ITGBL1O95965 494 aaPredicted RBP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 CYP3A4P08684 503 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 CYP3A7P24462 503 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 SREBF1P36956 1147 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 HSD17B4P51659 736 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 INHBEP58166 350 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 PWP2Q15269 919 aaKnown RBP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms