RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
CACNA1D-228ENST00000638120 SCAF8Q9UPN6 1271 aaKnown RBP13.9□□□□□ -0.18
CACNA1D-228ENST00000638120 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
CACNA1D-228ENST00000638120 ASTN2O75129 1339 aaPredicted RBP13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 EDIL3O43854 480 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 STAT2P52630 851 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 SARM1Q6SZW1 724 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 GRAMD1CQ8IYS0 662 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 FAM43AQ8N2R8 423 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 IQUBQ8NA54 791 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
CACNA1D-228ENST00000638120 ESPNB1AK53 854 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 TRIML1Q8N9V2 468 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 AK8Q96MA6 479 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 CCSER1Q9C0I3 900 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 PRR12Q9ULL5 1215 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 SBF1O95248 1867 aa13.88□□□□□ -0.19
CACNA1D-228ENST00000638120 PTMAP06454 111 aaKnown RBP13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 LMNB1P20700 586 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 PLA2G4DQ86XP0 818 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 DISC1Q9NRI5 854 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 GINM1Q9NU53 330 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 H7C1D1 291 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 IKBKBO14920 756 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 PLA2G6O60733 806 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 SMC2O95347 1197 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 BMP6P22004 513 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 SNAP25P60880 206 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 MORC3Q14149 939 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 PPP4R3AQ6IN85 833 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 ZSCAN30Q86W11 494 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 MTMR9Q96QG7 549 aa13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 GLIS2Q9BZE0 524 aaPredicted RBP13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
CACNA1D-228ENST00000638120 DOCK1Q14185 1865 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 SMTNL1A8MU46 457 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 MEIS2O14770 477 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 SLC37A4O43826 429 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 TDP2O95551 362 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 GCFC2P16383 781 aaKnown RBP13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 CDC25AP30304 524 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 AFMP43652 599 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 ZNF75DP51815 510 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 DPYDQ12882 1025 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 AP3B2Q13367 1082 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 NCAPHQ15003 741 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 MCTP2Q6DN12 878 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 GPC2Q8N158 579 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 NAP1L4Q99733 375 aaKnown RBP13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 GPRC5DQ9NZD1 345 aa13.86□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L15C9J2P7 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L13C9JLJ4 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L11C9JVI0 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L18D6R9N7 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L22D6RA61 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L17D6RBQ6 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L19D6RCP7 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L20D6RJB6 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 CTNND1O60716 968 aaKnown RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 UBA7P41226 1012 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 STAT6P42226 847 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L24Q0WX57 530 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 TRAF1Q13077 416 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 CALCRLQ16602 461 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USH1GQ495M9 461 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 FAM160B2Q86V87 743 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 MLKLQ8NB16 471 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 GSDMAQ96QA5 445 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 DACH1Q9UI36 760 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 MYL5Q02045 173 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 DCAF15Q66K64 600 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 IGSF22Q8N9C0 903 aa13.85□□□□□ -0.19
CACNA1D-228ENST00000638120 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms