RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNA1A-256	ENST00000637981		F5H6K3	240 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	PITPNM1	O00562	1244 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ATP2A1	O14983	1001 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ZBED4	O75132	1171 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NDUFB10	O96000	172 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	IGFBP4	P22692	258 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MRPS5	P82675	430 aa	Known RBP	11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	KLRC3	Q07444	240 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ADGRE1	Q14246	886 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RAB30	Q15771	203 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	STK11IP	Q8N1F8	1099 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ANKRD35	Q8N283	1001 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ADAMTS19	Q8TE59	1207 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	KIFC2	Q96AC6	838 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SEC62	Q99442	399 aa	Known RBP	11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RAVER2	Q9HCJ3	691 aa	Known RBP	11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NYAP2	Q9P242	653 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RAPGEFL1	Q9UHV5	662 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MSRA	Q9UJ68	235 aa		11.17	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SGSM2	O43147	1006 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	RASA1	P20936	1047 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CYP2C18	P33260	490 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	TDO2	P48775	406 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ARMCX2	Q7L311	632 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	IL27	Q8NEV9	243 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	HERVK_113	Q902F9	699 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FGD4	Q96M96	766 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	UHRF1	Q96T88	793 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NAPB	Q9H115	298 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MTIF3	Q9H2K0	278 aa	Known RBP	11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NKX2-4	Q9H2Z4	354 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MKNK2	Q9HBH9	465 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	IL23A	Q9NPF7	189 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CTNNA3	Q9UI47	895 aa		11.16	□□□□□ -0.62
CACNA1A-256	ENST00000637981	GSG1L2	A8MUP6	293 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CTAGE5	O15320	804 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CD4	P01730	458 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FGB	P02675	491 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLC3A2	P08195	630 aa	Known RBP	11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	BEX3	Q00994	111 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ALX1	Q15699	326 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	NOL8	Q76FK4	1167 aa	Known RBP	11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CCDC144CP	Q8IYA2	1237 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	IFNL3	Q8IZI9	196 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CHST13	Q8NET6	341 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ESYT1	Q9BSJ8	1104 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	DSCC1	Q9BVC3	393 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	HIPK3	Q9H422	1215 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLC28A3	Q9HAS3	691 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	SLC38A10	Q9HBR0	1119 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ZNF287	Q9HBT7	754 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	CLIP2	Q9UDT6	1046 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	FBXO40	Q9UH90	709 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	ZMYM6	O95789	1325 aa		11.15	□□□□□ -0.62
CACNA1A-256	ENST00000637981	MCM3AP	O60318	1980 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	MINDY4B	A8MYZ0	360 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	REC8	O95072	547 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	HSPD1	P10809	573 aa	Known RBP	11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	NKX3-2	P78367	333 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	TNFAIP2	Q03169	654 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	SBK1	Q52WX2	424 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	CXCL17	Q6UXB2	119 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	OTOP2	Q7RTS6	562 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	KATNBL1	Q9H079	304 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	HOMER2	Q9NSB8	354 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	FEM1B	Q9UK73	627 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	YBX2	Q9Y2T7	364 aa	Known RBP	11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	UMODL1	Q5DID0	1318 aa		11.14	□□□□□ -0.63
CACNA1A-256	ENST00000637981	OAZ1	P54368	228 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	CCL23	P55773	120 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	CNTN2	Q02246	1040 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	ITGA7	Q13683	1181 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	TLK2	Q86UE8	772 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	SLC43A3	Q8NBI5	491 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	CEP95	Q96GE4	821 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	GBF1	Q92538	1859 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	ASTN1	O14525	1302 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	TTC28	Q96AY4	2481 aa		11.13	□□□□□ -0.63
CACNA1A-256	ENST00000637981	IGKV6D-41	A0A0C4DH26	115 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	EPB41L2	O43491	1005 aa	Known RBP	11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	CABYR	O75952	493 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	NT5C2	P49902	561 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	RABGGTB	P53611	331 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	PDE4B	Q07343	736 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	FSCN1	Q16658	493 aa	Known RBP	11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	IMMT	Q16891	758 aa	Known RBP	11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	PPP2R2D	Q66LE6	453 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	LRRC47	Q8N1G4	583 aa	Known RBP	11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	MICALL1	Q8N3F8	863 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	MKL1	Q969V6	931 aa		11.12	□□□□□ -0.63
CACNA1A-256	ENST00000637981	AP5M1	Q9H0R1	490 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms