RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CHURC1Q8WUH1 139 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 DCAF4Q8WV16 495 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 TBC1D5Q92609 795 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 DDX11Q96FC9 970 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 DSCC1Q9BVC3 393 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 UPF3AQ9H1J1 476 aaKnown RBP9.25□□□□□ -0.93
PNKP-229ENST00000637897 ACAD9Q9H845 621 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 SLC5A4Q9NY91 659 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 ZSWIM5Q9P217 1185 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
PNKP-229ENST00000637897 GRIN2DO15399 1336 aa9.25□□□□□ -0.93
PNKP-229ENST00000637897 DUSP11O75319 330 aaKnown RBP9.24□□□□□ -0.93
PNKP-229ENST00000637897 ICAM1P05362 532 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 GOLGA8HP0CJ92 632 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 RARBP10826 455 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 ALAS1P13196 640 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 SMPD1P17405 629 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 CST5P28325 142 aaPredicted RBP9.24□□□□□ -0.93
PNKP-229ENST00000637897 CDK7P50613 346 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 ACLYP53396 1101 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 FAAP100Q0VG06 881 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 SEC23AQ15436 765 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 KCNA10Q16322 511 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 SLC30A10Q6XR72 485 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 MFSD6Q6ZSS7 791 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 STOX1Q6ZVD7 989 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 TDHQ8IZJ6 230 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 ANKRD35Q8N283 1001 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 ENAHQ8N8S7 591 aaPredicted RBP9.24□□□□□ -0.93
PNKP-229ENST00000637897 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 ZHX1Q9UKY1 873 aaPredicted RBP9.24□□□□□ -0.93
PNKP-229ENST00000637897 ATP11BQ9Y2G3 1177 aa9.24□□□□□ -0.93
PNKP-229ENST00000637897 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 OPLAHO14841 1288 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 KDM4AO75164 1064 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 MYCNP04198 464 aaPredicted RBP9.23□□□□□ -0.93
PNKP-229ENST00000637897 FDX1P10109 184 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 CHMLP26374 656 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 GJA9P57773 515 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 BEX3Q00994 111 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 BAATQ14032 418 aaPredicted RBP9.23□□□□□ -0.93
PNKP-229ENST00000637897 SHHQ15465 462 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 CCDC96Q2M329 555 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 TKFCQ3LXA3 575 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 FBXO16Q8IX29 292 aaPredicted RBP9.23□□□□□ -0.93
PNKP-229ENST00000637897 STAG2Q8N3U4 1231 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 BADQ92934 168 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 TTC14Q96N46 770 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
PNKP-229ENST00000637897 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 TOMM22Q9NS69 142 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 COL20A1Q9P218 1284 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 ZBTB47Q9UFB7 747 aaPredicted RBP9.23□□□□□ -0.93
PNKP-229ENST00000637897 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 FAM184BQ9ULE4 1060 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 CCPG1Q9ULG6 757 aa9.23□□□□□ -0.93
PNKP-229ENST00000637897 BAZ2BQ9UIF8 2168 aaKnown RBP9.22□□□□□ -0.93
PNKP-229ENST00000637897 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 KBTBD13C9JR72 458 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 ZNF213O14771 459 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
PNKP-229ENST00000637897 ASGR1P07306 291 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 CYP21A2P08686 494 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 EDNRBP24530 442 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 ANTXR2P58335 489 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 C16orf59Q7L2K0 433 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 EEPD1Q7L9B9 569 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 ANKRD33Q7Z3H0 272 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 DGKHQ86XP1 1220 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 SLC43A3Q8NBI5 491 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 TSEN34Q9BSV6 310 aaKnown RBP9.22□□□□□ -0.93
PNKP-229ENST00000637897 TBX21Q9UL17 535 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 CNPY2Q9Y2B0 182 aa9.22□□□□□ -0.93
PNKP-229ENST00000637897 RBM47A0AV96 593 aaKnown RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 SGSM2O43147 1006 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 ARIH2O95376 493 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 PCP11498 1178 aaKnown RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 ALDH5A1P51649 535 aaPredicted RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 RPS6P62753 249 aaKnown RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 IKQ13123 557 aaPredicted RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 NSMFQ6X4W1 530 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 RNF180Q86T96 592 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 PNMA1Q8ND90 353 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 SLC17A8Q8NDX2 589 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 MTMR8Q96EF0 704 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 JMJD4Q9H9V9 463 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 DIAPH3Q9NSV4 1193 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 MTMR10Q9NXD2 777 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
PNKP-229ENST00000637897 TNKSO95271 1327 aa9.21□□□□□ -0.94
PNKP-229ENST00000637897 CYTH3O43739 400 aa9.2□□□□□ -0.94
PNKP-229ENST00000637897 PQBP1O60828 265 aaKnown RBP9.2□□□□□ -0.94
PNKP-229ENST00000637897 CD4P01730 458 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms