RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 CHRNDQ07001 517 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 STK4Q13043 487 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 DTHD1Q6ZMT9 781 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 C2CD5Q86YS7 1000 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 SPATA4Q8NEY3 305 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 THAP9Q9H5L6 903 aa22.53■■□□□ 1.2
CACNA1A-243ENST00000637616 NUTM2BA6NNL0 878 aaPredicted RBP22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 NUTM2EB1AL46 878 aaPredicted RBP22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 ANAPC4Q9UJX5 808 aa22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 ZBED6P86452 979 aa22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 PDCLQ13371 301 aa22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 SPA17Q15506 151 aa22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 KCTD19Q17RG1 926 aaPredicted RBP22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 INF2Q27J81 1249 aa22.52■■□□□ 1.2
CACNA1A-243ENST00000637616 GRIN2DO15399 1336 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 VAV2P52735 878 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 PPFIA1Q13136 1202 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 IFIH1Q9BYX4 1025 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 GUCY2CP25092 1073 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 PFKFB3Q16875 520 aaPredicted RBP22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 TTMPQ5BVD1 217 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 BLIDQ8IZY5 108 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 GIMAP8Q8ND71 665 aaPredicted RBP22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 MS4A14Q96JA4 679 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 CCDC70Q6NSX1 233 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 ZNF384Q8TF68 577 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 DEF6Q9H4E7 631 aa22.51■■□□□ 1.19
CACNA1A-243ENST00000637616 ESYT3A0FGR9 886 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 ZEB2O60315 1214 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 KRT14P02533 472 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 PDE4DQ08499 809 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 STAG2Q8N3U4 1231 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 ARHGAP20Q9P2F6 1191 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 SALL4Q9UJQ4 1053 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 ZSCAN5CA6NGD5 496 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 EIF3HO15372 352 aaKnown RBP eCLIP22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 CALM1P0DP23 149 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 CALM2P0DP24 149 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 CALM3P0DP25 149 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 MIIPQ5JXC2 388 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 PURBQ96QR8 312 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 PCDHA13Q9Y5I0 950 aa22.5■■□□□ 1.19
CACNA1A-243ENST00000637616 ANO9A1A5B4 782 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 BUB1O43683 1085 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 IGHMBP2P38935 993 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 OSBPL9Q96SU4 736 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 PYM1Q9BRP8 204 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 TRAPPC10P48553 1259 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 CCDC170Q8IYT3 715 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 ZNF34Q8IZ26 560 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 JAG2Q9Y219 1238 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 BAZ2AQ9UIF9 1905 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 DDAH1O94760 285 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 EIF4A3P38919 411 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 CCDC181Q5TID7 509 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 P2RX5Q93086 422 aa22.49■■□□□ 1.19
CACNA1A-243ENST00000637616 RHOBTB3O94955 611 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 RNASE9P60153 205 aaKnown RBP22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 ARL6IP4Q66PJ3 421 aaKnown RBP22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 TMC4Q7Z404 712 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 AMOTL1Q8IY63 956 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 GPATCH11Q8N954 259 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 CARD10Q9BWT7 1032 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 CCDC194A0A1B0GVG4 234 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 TACC1O75410 805 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 PLCG1P19174 1290 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 IQCEQ6IPM2 695 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 MMS22LQ6ZRQ5 1243 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 MMGT1Q8N4V1 131 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 MMRN2Q9H8L6 949 aa22.48■■□□□ 1.19
CACNA1A-243ENST00000637616 NAP1L1P55209 391 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 ASIC1P78348 528 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 RUFY1Q96T51 708 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 RBM12Q9NTZ6 932 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 DISP2A7MBM2 1401 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 LOC102724159A0A0B4J2E5 919 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 CPP00450 1065 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 KIF11P52732 1056 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 PWP2Q15269 919 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 HAUS3Q68CZ6 603 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 TRIM58Q8NG06 486 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 IFT81Q8WYA0 676 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 SH2D4AQ9H788 454 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 SLC39A2Q9NP94 309 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 KBTBD4Q9NVX7 518 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 MYH13Q9UKX3 1938 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 MYH10P35580 1976 aa22.47■■□□□ 1.19
CACNA1A-243ENST00000637616 TSPY2A6NKD2 308 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 AKR1B10O60218 316 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 NUP58Q9BVL2 599 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 CPVLQ9H3G5 476 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 FAM153BP0C7A2 387 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 APBA1Q02410 837 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 KCNB1Q14721 858 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 FAM153CQ494X1 144 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 ZNF662Q6ZS27 426 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 ZIM3Q96PE6 472 aa22.46■■□□□ 1.19
CACNA1A-243ENST00000637616 FAM153AQ9UHL3 310 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms