RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 HOMER1Q86YM7 354 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 NIM1KQ8IY84 436 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 PDILTQ8N807 584 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 MLKLQ8NB16 471 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ENOX1Q8TC92 643 aaKnown RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 TBCKQ8TEA7 893 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 CCDC12Q8WUD4 166 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ANP32BQ92688 251 aaKnown RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 HAS1Q92839 578 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 DHX58Q96C10 678 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ZNF830Q96NB3 372 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 PNMA5Q96PV4 448 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 GSDMAQ96QA5 445 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 NUP88Q99567 741 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 TMEM39BQ9GZU3 492 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 TAOK3Q9H2K8 898 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 TTC12Q9H892 705 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 MYOZ2Q9NPC6 264 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 BLOC1S4Q9NUP1 217 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 SPTLC3Q9NUV7 552 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 INTS13Q9NVM9 706 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 BIN2Q9UBW5 565 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ZNF112Q9UJU3 913 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ZBTB21Q9ULJ3 1066 aa5.46□□□□□ -1.54
SCN8A-213ENST00000637540 ZNFX1Q9P2E3 1918 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 SMTNL1A8MU46 457 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 MPHOSPH10O00566 681 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 MYO1BO43795 1136 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 GTPBP6O43824 516 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 TDP2O95551 362 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 OR52Z1P0C646 297 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 BMP3P12645 472 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 ATP1A3P13637 1013 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 ERCC5P28715 1186 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 PBX1P40424 430 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 FXR2P51116 673 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 ADCY7P51828 1080 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 FANCCQ00597 558 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 MYL5Q02045 173 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 GHRHRQ02643 423 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 RASSF7Q02833 373 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 SEMA3FQ13275 785 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 GRB10Q13322 594 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 PDIA5Q14554 519 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 ARID5BQ14865 1188 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 KARSQ15046 597 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 CDC37Q16543 378 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 UBE2SQ16763 222 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 HYIQ5T013 277 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 RBM26Q5T8P6 1007 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 SYDE2Q5VT97 1194 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 CNNM4Q6P4Q7 775 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 MOXD1Q6UVY6 613 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 DTHD1Q6ZMT9 781 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 POTEDQ86YR6 584 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 TEX2Q8IWB9 1127 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 OGFOD1Q8N543 542 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 IQUBQ8NA54 791 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 NLGN2Q8NFZ4 835 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 KIAA1524Q8TCG1 905 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 CACTINQ8WUQ7 758 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 LENG9Q96B70 501 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 TRIM44Q96DX7 344 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 AK8Q96MA6 479 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 NAP1L5Q96NT1 182 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 NUDT12Q9BQG2 462 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 GLIS2Q9BZE0 524 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 NAT10Q9H0A0 1025 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 RANBP17Q9H2T7 1088 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 VCPKMTQ9H867 229 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 KCNMB3Q9NPA1 279 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 RTN4Q9NQC3 1192 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 SEC63Q9UGP8 760 aaKnown RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 PRR12Q9ULL5 1215 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 PYCARDQ9ULZ3 195 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 SSC5DA1L4H1 1573 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 DOCK5Q9H7D0 1870 aa5.45□□□□□ -1.54
SCN8A-213ENST00000637540 ASTN2O75129 1339 aaPredicted RBP5.45□□□□□ -1.54
SCN8A-213ENST00000637540 A0A0G2JMZ2 1700 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 LRRC10BA6NIK2 292 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L15C9J2P7 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L13C9JLJ4 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 TMEM232C9JQI7 657 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L11C9JVI0 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L18D6R9N7 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L22D6RA61 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L17D6RBQ6 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L19D6RCP7 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 USP17L20D6RJB6 530 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 GOLGA6L19H0YKK7 550 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 PIK3CDO00329 1044 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 OFD1O75665 1012 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 RHOBTB3O94955 611 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 CYP3A4P08684 503 aa5.44□□□□□ -1.54
SCN8A-213ENST00000637540 PTGS1P23219 599 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms