RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MAP3K20Q9NYL2 800 aaKnown RBP15.36■□□□□ 0.05
LINC00643-207ENST00000637212 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
LINC00643-207ENST00000637212 BTBD19C9JJ37 291 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 PDHXO00330 501 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 HERVK_113P62684 666 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
LINC00643-207ENST00000637212 AGBL1Q96MI9 1066 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 ZNF396Q96N95 335 aaPredicted RBP15.35■□□□□ 0.05
LINC00643-207ENST00000637212 GBP4Q96PP9 640 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 RAVER2Q9HCJ3 691 aaKnown RBP15.35■□□□□ 0.05
LINC00643-207ENST00000637212 CCPG1Q9ULG6 757 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 ATAD5Q96QE3 1844 aa15.35■□□□□ 0.05
LINC00643-207ENST00000637212 KIF28PB7ZC32 967 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 PIK3CDO00329 1044 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 FOSP01100 380 aaPredicted RBP15.34■□□□□ 0.05
LINC00643-207ENST00000637212 STAT3P40763 770 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 MKRN3Q13064 507 aaKnown RBP15.34■□□□□ 0.05
LINC00643-207ENST00000637212 TMEM132BQ14DG7 1078 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 USH1GQ495M9 461 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 OXER1Q8TDS5 423 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 PTPN18Q99952 460 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 CFAP45Q9UL16 551 aa15.34■□□□□ 0.05
LINC00643-207ENST00000637212 ZNF214Q9UL59 606 aaPredicted RBP15.34■□□□□ 0.05
LINC00643-207ENST00000637212 PHIPQ8WWQ0 1821 aa15.33■□□□□ 0.05
LINC00643-207ENST00000637212 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
LINC00643-207ENST00000637212 COPB2P35606 906 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 TM4SF4P48230 202 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 GCLCP48506 637 aaPredicted RBP15.33■□□□□ 0.04
LINC00643-207ENST00000637212 TRAPPC10P48553 1259 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 CLK2P49760 499 aaKnown RBP15.33■□□□□ 0.04
LINC00643-207ENST00000637212 GHRHRQ02643 423 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 SREBF2Q12772 1141 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 NR5A1Q13285 461 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
LINC00643-207ENST00000637212 DNAJC5GQ8N7S2 189 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 RBPJLQ9UBG7 517 aa15.33■□□□□ 0.04
LINC00643-207ENST00000637212 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 GCOM1H8Y6P7 765 aaPredicted RBP15.32■□□□□ 0.04
LINC00643-207ENST00000637212 SLC25A27O95847 323 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 POLR2MP0CAP2 368 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 RIOX2Q8IUF8 465 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
LINC00643-207ENST00000637212 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
LINC00643-207ENST00000637212 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 MEIS2O14770 477 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 OPLAHO14841 1288 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 ALAS1P13196 640 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 KRT85P78386 507 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 DNM1Q05193 864 aaKnown RBP15.31■□□□□ 0.04
LINC00643-207ENST00000637212 NOGQ13253 232 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 SNRNP48Q6IEG0 339 aaKnown RBP15.31■□□□□ 0.04
LINC00643-207ENST00000637212 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 PARK7Q99497 189 aaKnown RBP15.31■□□□□ 0.04
LINC00643-207ENST00000637212 SCAND2PQ9GZW5 306 aaPredicted RBP15.31■□□□□ 0.04
LINC00643-207ENST00000637212 BTBD7Q9P203 1132 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
LINC00643-207ENST00000637212 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
LINC00643-207ENST00000637212 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 CNMDO75829 334 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 HSD17B4P51659 736 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 NONOQ15233 471 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00643-207ENST00000637212 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 MORF4L1Q9UBU8 362 aa15.3■□□□□ 0.04
LINC00643-207ENST00000637212 CYP2C8P10632 490 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 TOB1P50616 345 aaPredicted RBP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 USP11P51784 963 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 HTRA3P83110 453 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 PLS1Q14651 629 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 FAM173BQ6P4H8 233 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 SHCBP1Q8NEM2 672 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 SMCR8Q8TEV9 937 aaPredicted RBP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 NAP1L4Q99733 375 aaKnown RBP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 POLR3EQ9NVU0 708 aa15.29■□□□□ 0.04
LINC00643-207ENST00000637212 TFIP11Q9UBB9 837 aaKnown RBP15.29■□□□□ 0.04
LINC00643-207ENST00000637212 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms