RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
CHD2-225ENST00000636861 NOP53Q9NZM5 478 aaKnown RBP4.5□□□□□ -1.69
CHD2-225ENST00000636861 TTF2Q9UNY4 1162 aaKnown RBP4.5□□□□□ -1.69
CHD2-225ENST00000636861 TRPC6Q9Y210 931 aa4.5□□□□□ -1.69
CHD2-225ENST00000636861 MTMR6Q9Y217 621 aa4.5□□□□□ -1.69
CHD2-225ENST00000636861 GMEB1Q9Y692 573 aa4.5□□□□□ -1.69
CHD2-225ENST00000636861 PRRC2BQ5JSZ5 2229 aaKnown RBP4.5□□□□□ -1.69
CHD2-225ENST00000636861 UBR5O95071 2799 aaPredicted RBP4.5□□□□□ -1.69
CHD2-225ENST00000636861 FBN3Q75N90 2809 aa4.5□□□□□ -1.69
CHD2-225ENST00000636861 UBN2Q6ZU65 1347 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 LTBP2Q14767 1821 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 HSF2BPO75031 334 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 E2F6O75461 281 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 AP1G2O75843 785 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 FLOT1O75955 427 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 GSTA1P08263 222 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 GHRP10912 638 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 EPB41P11171 864 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 HMGB2P26583 209 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 PSMA5P28066 241 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 GJB2P29033 226 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CNGA1P29973 690 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 FNTAP49354 379 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 IRAK1P51617 712 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 INHBEP58166 350 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CCT2P78371 535 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 MRPS35P82673 323 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 DNM1Q05193 864 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 SF3A1Q15459 793 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 NEUROD2Q15784 382 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 ENOX2Q16206 610 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 TLDC1Q6P9B6 456 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CYB5D1Q6P9G0 228 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 MTHFD1LQ6UB35 978 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 TTLL7Q6ZT98 887 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 LCA5Q86VQ0 697 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 TRIM42Q8IWZ5 723 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CCDC65Q8IXS2 484 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CKAP2LQ8IYA6 745 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CCDC13Q8IYE1 715 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 ARHGAP18Q8N392 663 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 IGSF22Q8N9C0 903 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 ACRBPQ8NEB7 543 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 SPDYE1Q8NFV5 336 aaPredicted RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 PARD3BQ8TEW8 1205 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 DIS3LQ8TF46 1054 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 EZH1Q92800 747 aaPredicted RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 THOC1Q96FV9 657 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 BORCS6Q96GS4 357 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 GDAP1L1Q96MZ0 367 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 SCLT1Q96NL6 688 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 UIMC1Q96RL1 719 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 NAP1L3Q99457 506 aaPredicted RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 VCXQ9H320 206 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 RMI1Q9H9A7 625 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 PAPOLBQ9NRJ5 636 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 FAM86C1Q9NVL1 165 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 TUBA8Q9NY65 449 aaPredicted RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 TFIP11Q9UBB9 837 aaKnown RBP4.49□□□□□ -1.69
CHD2-225ENST00000636861 CTNNAL1Q9UBT7 734 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 CIDEBQ9UHD4 219 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 BLOC1S6Q9UL45 172 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 TNNQ9UQP3 1299 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 PPP2R2CQ9Y2T4 447 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 DAAM1Q9Y4D1 1078 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 PCDHGA4Q9Y5G9 962 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 USP16Q9Y5T5 823 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 ATRNL1Q5VV63 1379 aa4.49□□□□□ -1.69
CHD2-225ENST00000636861 KMT2EQ8IZD2 1858 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 HMGB1P1B2RPK0 211 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 TMEM232C9JQI7 657 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ZSCAN9O15535 394 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 SMNDC1O75940 238 aaKnown RBP eCLIP4.48□□□□□ -1.692e-6■■□□□ 12.7
CHD2-225ENST00000636861 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 EGFRP00533 1210 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 SERPINB2P05120 415 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 ZKSCAN1P17029 563 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 VCAM1P19320 739 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TPP2P29144 1249 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 RANBP1P43487 201 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 FAM160A1Q05DH4 1040 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 NNTQ13423 1086 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 RIPK1Q13546 671 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 MYBPC2Q14324 1141 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 RASA3Q14644 834 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 TAF7Q15545 349 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 CAMK4Q16566 473 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 IFI16Q16666 785 aaKnown RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 TBC1D25Q3MII6 688 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 FOXD4L6Q3SYB3 417 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 KBTBD12Q3ZCT8 623 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 PLEKHO1Q53GL0 409 aaPredicted RBP4.48□□□□□ -1.69
CHD2-225ENST00000636861 CCDC178Q5BJE1 867 aa4.48□□□□□ -1.69
CHD2-225ENST00000636861 SPECC1Q5M775 1068 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms