RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KCNA1Q09470 495 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 PLBD2Q8NHP8 589 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 TEKT3Q9BXF9 490 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 SCAF11Q99590 1463 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 ERBB3P21860 1342 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 ANKRD20A3Q5VUR7 823 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
CACNA1A-227ENST00000636549 ANXA13P27216 316 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 SSTR3P32745 418 aaPredicted RBP19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 MAGEA1P43355 309 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 MTERF2Q49AM1 385 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 SEPT8Q92599 483 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 GJA10Q969M2 543 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 CSRNP1Q96S65 589 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 SERTAD1Q9UHV2 236 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 CFAP65Q6ZU64 1925 aaKnown RBP19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 NDUFAB1O14561 156 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 CACNB2Q08289 660 aaPredicted RBP19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 HADHQ16836 314 aaKnown RBP19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 ARMC9Q7Z3E5 817 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.71
CACNA1A-227ENST00000636549 MYL1P05976 194 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 STX2P32856 288 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 ATP1A2P50993 1020 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 IFT20Q8IY31 132 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 DNAAF3Q8N9W5 541 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 NLRP4Q96MN2 994 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 FAM160B1Q5W0V3 765 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 EYA2O00167 538 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 CLIC2O15247 247 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 ABCB5Q2M3G0 1257 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 CCDC93Q567U6 631 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 HSPH1Q92598 858 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 HVCN1Q96D96 273 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 IPO11Q9UI26 975 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 POLR2FP61218 127 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 PABPC4Q13310 644 aaKnown RBP eCLIP19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 TRIP13Q15645 432 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 ZNF449Q6P9G9 518 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 TEX2Q8IWB9 1127 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 SARS2Q9NP81 518 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-227ENST00000636549 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 RXRBP28702 533 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 FANCCQ00597 558 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 COG4Q9H9E3 785 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 YWHAEP62258 255 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 TNFAIP1Q13829 316 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 RINT1Q6NUQ1 792 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 DPYSL4O14531 572 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 HADHAP40939 763 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 CLNS1AP54105 237 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 POSTNQ15063 836 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 CCDC94Q9BW85 323 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 ANKRD36BP1Q96IX9 119 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 DBN1Q16643 649 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 PGBD3Q8N328 593 aa19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 ANGEL1Q9UNK9 670 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-227ENST00000636549 FAM117BQ6P1L5 589 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 WDR91A4D1P6 747 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 DCAF15Q66K64 600 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 KRT25Q7Z3Z0 450 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 AMFRQ9UKV5 643 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 ZNF148Q9UQR1 794 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 YWHAHQ04917 246 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 PCDHA12Q9UN75 941 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 LRRN2O75325 713 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 RNF219Q5W0B1 726 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 DSTYKQ6XUX3 929 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 FAM71BQ8TC56 605 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 METTL22Q9BUU2 404 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 IFT122Q9HBG6 1241 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 BFSP1Q12934 665 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 TRMT10CQ7L0Y3 403 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 RASGRP4Q8TDF6 673 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 PNMA2Q9UL42 364 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 TPX2Q9ULW0 747 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 PTPREP23469 700 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 MESDQ14696 234 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 FAM178BQ8IXR5 827 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 RPGRIP1Q96KN7 1286 aa19.49■□□□□ 0.71
CACNA1A-227ENST00000636549 CHMLP26374 656 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 SLC10A4Q96EP9 437 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 TBC1D32Q96NH3 1257 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 INTUQ9ULD6 942 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 KRIT1O00522 736 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 XRCC5P13010 732 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 MUM1Q2TAK8 710 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 FASTKD5Q7L8L6 764 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 TTC25Q96NG3 672 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 ZNF577Q9BSK1 485 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 RAD50Q92878 1312 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 PARP10Q53GL7 1025 aa19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.48■□□□□ 0.71
CACNA1A-227ENST00000636549 ZNF202O95125 648 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms