RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	FBXL6	Q8N531	539 aa		11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	RETREG2	Q8NC44	543 aa		11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	PABPC5	Q96DU9	382 aa	Known RBP	11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	POP1	Q99575	1024 aa	Known RBP	11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	IRF2BPL	Q9H1B7	796 aa		11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	PIH1D3	Q9NQM4	214 aa	Known RBP	11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	COL4A6	Q14031	1691 aa		11.9	□□□□□ -0.5
SPTAN1-231	ENST00000636337	ZFHX4	Q86UP3	3567 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	NAV1	Q8NEY1	1877 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DEFB103A	P81534	67 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CERS3	Q8IU89	383 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	ANKRD35	Q8N283	1001 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FBXO22	Q8NEZ5	403 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MRPL38	Q96DV4	380 aa	Known RBP	11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CRBN	Q96SW2	442 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	RAD9A	Q99638	391 aa		11.89	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MYH8	P13535	1937 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337		H0Y858	1186 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PITPNM1	O00562	1244 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SRGAP3	O43295	1099 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	RAD21	O60216	631 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SMPD1	P17405	629 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	VCP	P55072	806 aa	Known RBP	11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SMAD2	Q15796	467 aa	Known RBP	11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PTPRO	Q16827	1216 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TIGD5	Q53EQ6	642 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TCEAL5	Q5H9L2	206 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FAM83B	Q5T0W9	1011 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	BANK1	Q8NDB2	785 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	C17orf80	Q9BSJ5	609 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TLR9	Q9NR96	1032 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CLDND1	Q9NY35	253 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CTNNA3	Q9UI47	895 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TRPC6	Q9Y210	931 aa		11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.88	□□□□□ -0.51
SPTAN1-231	ENST00000636337	GVINP1	Q7Z2Y8	2422 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PRR23A	A6NEV1	266 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PROB1	E7EW31	1015 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	IDH1	O75874	414 aa	Known RBP	11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	RGS20	O76081	388 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	GJB5	O95377	273 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	AKR1B1	P15121	316 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	ZAP70	P43403	619 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CLUL1	Q15846	466 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FAM47C	Q5HY64	1035 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FAM117B	Q6P1L5	589 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CPXCR1	Q8N123	301 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FSD1	Q9BTV5	496 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	HDAC5	Q9UQL6	1122 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DNAH14	Q0VDD8	3507 aa		11.87	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MED19	A0JLT2	244 aa	Predicted RBP	11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	IGSF3	O75054	1194 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	EEF2	P13639	858 aa	Known RBP	11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CNTN2	Q02246	1040 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	BFSP2	Q13515	415 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	COL19A1	Q14993	1142 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CCDC184	Q52MB2	194 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CCDC158	Q5M9N0	1113 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PPP1R13L	Q8WUF5	828 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SLF1	Q9BQI6	1058 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	GOPC	Q9HD26	462 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MCM9	Q9NXL9	1143 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DMXL1	Q9Y485	3027 aa		11.86	□□□□□ -0.51
SPTAN1-231	ENST00000636337	WDR87	Q6ZQQ6	2873 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	NCOR2	Q9Y618	2525 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CYP2D6	P10635	497 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	LTBR	P36941	435 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	ZXDA	P98168	799 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TMEM63B	Q5T3F8	832 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SSH1	Q8WYL5	1049 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	NUP88	Q99567	741 aa	Predicted RBP	11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DBNDD2	Q9BQY9	259 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PDGFC	Q9NRA1	345 aa		11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DDX49	Q9Y6V7	483 aa	Known RBP	11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TRIP12	Q14669	1992 aa	Predicted RBP	11.85	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MYO7A	Q13402	2215 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	TPR	P12270	2363 aa	Known RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	STXBP3	O00186	592 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MBTPS2	O43462	519 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	KDM4A	O75164	1064 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MYL3	P08590	195 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	AVPR2	P30518	371 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	PURA	Q00577	322 aa	Known RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	NBPF20	Q3BBV1	942 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	EEPD1	Q7L9B9	569 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	RPAIN	Q86UA6	219 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FBXO16	Q8IX29	292 aa	Predicted RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	DYNLL2	Q96FJ2	89 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	MEIS3	Q99687	375 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	NSUN3	Q9H649	340 aa	Known RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	RAVER2	Q9HCJ3	691 aa	Known RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	HOMER2	Q9NSB8	354 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	POLR3E	Q9NVU0	708 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	SWAP70	Q9UH65	585 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	FBXO40	Q9UH90	709 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337		Q9Y3F1	56 aa		11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.84	□□□□□ -0.51
SPTAN1-231	ENST00000636337	ASB14	A6NK59	587 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms