RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CCDC96Q2M329 555 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 RASSF8Q8NHQ8 419 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
CACNA1A-220ENST00000635988 FGRP09769 529 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 DTHD1Q6ZMT9 781 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 LRRC1Q9BTT6 524 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 HYOU1Q9Y4L1 999 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 KLRC4O43908 158 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 STIM2Q9P246 746 aa16.5■□□□□ 0.23
CACNA1A-220ENST00000635988 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 CCNE1P24864 410 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 UBA7P41226 1012 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 TMED8Q6PL24 325 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 ZSCAN29Q8IWY8 852 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 DUSP10Q9Y6W6 482 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 NAALADL2Q58DX5 795 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 P2RX5Q93086 422 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 DUSP9Q99956 384 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 SH3GLB2Q9NR46 395 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
CACNA1A-220ENST00000635988 ZEB2O60315 1214 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 MTIF2P46199 727 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 BCAMP50895 628 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 TEX2Q8IWB9 1127 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 CNOT6LQ96LI5 555 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 OSBPL9Q96SU4 736 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 NOC4LQ9BVI4 516 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 DCCP43146 1447 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 LAD1O00515 517 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 RNF14Q9UBS8 474 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
CACNA1A-220ENST00000635988 NDUFAB1O14561 156 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 LCA5LO95447 670 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 HNRNPH1P31943 449 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 KIF5BP33176 963 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 KAT2BQ92831 832 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 CNPY4Q8N129 248 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 HDAC7Q8WUI4 952 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
CACNA1A-220ENST00000635988 ZNF263O14978 683 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 C8orf74Q6P047 294 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 IFT20Q8IY31 132 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 PCDHA4Q9UN74 947 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 CAPN6Q9Y6Q1 641 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
CACNA1A-220ENST00000635988 ORC4O43929 436 aa16.46■□□□□ 0.22
CACNA1A-220ENST00000635988 EMC10Q5UCC4 262 aa16.46■□□□□ 0.22
CACNA1A-220ENST00000635988 HAUS3Q68CZ6 603 aa16.46■□□□□ 0.22
CACNA1A-220ENST00000635988 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.22
CACNA1A-220ENST00000635988 SNAP23O00161 211 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 PRPHP41219 470 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 MNAT1P51948 309 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 KIF11P52732 1056 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 MIIPQ5JXC2 388 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 ADGRA1Q86SQ6 560 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 ZNF34Q8IZ26 560 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 EHD4Q9H223 541 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 CCDC194A0A1B0GVG4 234 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 KLK7P49862 253 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms