RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 EPB41L5Q9HCM4 733 aa12.78□□□□□ -0.36
COL11A1-211ENST00000635193 TLR7Q9NYK1 1049 aaKnown RBP12.78□□□□□ -0.36
COL11A1-211ENST00000635193 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
COL11A1-211ENST00000635193 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 CREB3O43889 395 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 EEF1GP26641 437 aaKnown RBP12.77□□□□□ -0.36
COL11A1-211ENST00000635193 BIRC2Q13490 618 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
COL11A1-211ENST00000635193 RDH13Q8NBN7 331 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 THAP12O43422 761 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 SLC1A4P43007 532 aa12.77□□□□□ -0.36
COL11A1-211ENST00000635193 KIF23Q02241 960 aaPredicted RBP12.77□□□□□ -0.36
COL11A1-211ENST00000635193 MORC2Q9Y6X9 1032 aaPredicted RBP12.77□□□□□ -0.36
COL11A1-211ENST00000635193 NR1D1P20393 614 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 ENOX1Q8TC92 643 aaKnown RBP12.77□□□□□ -0.37
COL11A1-211ENST00000635193 PANK4Q9NVE7 773 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 USP17L12C9JPN9 530 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 USP17L21D6R901 530 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 IL9RQ01113 521 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 ALS2CLQ60I27 953 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.37
COL11A1-211ENST00000635193 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.37
COL11A1-211ENST00000635193 DBNLQ9UJU6 430 aaKnown RBP12.77□□□□□ -0.37
COL11A1-211ENST00000635193 DDX39AO00148 427 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 RNF8O76064 485 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 RNASELQ05823 741 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 CNOT10Q9H9A5 744 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 UFL1O94874 794 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 PALM2Q8IXS6 379 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 PPP4R1Q8TF05 950 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 SAMSN1Q9NSI8 373 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 TXLNGQ9NUQ3 528 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 VPS41P49754 854 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 YIPF3Q9GZM5 350 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 MX2P20592 715 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 PHBP35232 272 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 CYP2J2P51589 502 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL11A1-211ENST00000635193 LRRC24Q50LG9 513 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 RIC8AQ9NPQ8 531 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
COL11A1-211ENST00000635193 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 APOA5Q6Q788 366 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CTAGE3PQ8IX95 158 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 GRAMD1CQ8IYS0 662 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 ATP8A2Q9NTI2 1148 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 MAP3K7O43318 606 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 DNAJC8O75937 253 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 DDAH1O94760 285 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 ADAM9Q13443 819 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 USH1GQ495M9 461 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 GALNT17Q6IS24 598 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 EYA3Q99504 573 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 IFNB1P01574 187 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 LRRC43Q8N309 656 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 NCAPGQ9BPX3 1015 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 ERVK-7P63135 1459 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 PHEXP78562 749 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CASC4Q6P4E1 433 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 TPH2Q8IWU9 490 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 CTSWP56202 376 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 DHTKD1Q96HY7 919 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-211ENST00000635193 ARHGEF10LQ9HCE6 1279 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
COL11A1-211ENST00000635193 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms