RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
LINC00339-208ENST00000634934 RLFQ13129 1914 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 STXBP3O00186 592 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 CNMDO75829 334 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 ALAS1P13196 640 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 XBP1P17861 261 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 STAT3P40763 770 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 OAZ1P54368 228 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 NAPAP54920 295 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 TRAF1Q13077 416 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 TRIM29Q14134 588 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
LINC00339-208ENST00000634934 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 TEX13BQ9BXU2 312 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 GJB4Q9NTQ9 266 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 BARHL2Q9NY43 387 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 CPA4Q9UI42 421 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
LINC00339-208ENST00000634934 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
LINC00339-208ENST00000634934 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 ATP2A1O14983 1001 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
LINC00339-208ENST00000634934 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 SPATC1LQ9H0A9 340 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
LINC00339-208ENST00000634934 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 ABCB11O95342 1321 aa16.61■□□□□ 0.25
LINC00339-208ENST00000634934 PDCP20941 246 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 NLRP5P59047 1200 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 ERVK-24P63145 666 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 Q3C1V9 767 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 TYW1BQ6NUM6 668 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
LINC00339-208ENST00000634934 TNPO1Q92973 898 aaKnown RBP16.6■□□□□ 0.25
LINC00339-208ENST00000634934 H3BQV1 296 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 GPR25O00155 361 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 TLR2O60603 784 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 IFFO2Q5TF58 517 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
LINC00339-208ENST00000634934 TRERF1Q96PN7 1200 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 SH3GLB2Q9NR46 395 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
LINC00339-208ENST00000634934 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
LINC00339-208ENST00000634934 ADGRA2Q96PE1 1338 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 SMCO2A6NFE2 343 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 NUCB2P80303 420 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 KRT40Q6A162 431 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 PPP1R18Q6NYC8 613 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 RIOX2Q8IUF8 465 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
LINC00339-208ENST00000634934 SHISA4Q96DD7 197 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
LINC00339-208ENST00000634934 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 MORF4L1Q9UBU8 362 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 MYH6P13533 1939 aa16.59■□□□□ 0.25
LINC00339-208ENST00000634934 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-208ENST00000634934 SLC25A27O95847 323 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 SYT1P21579 422 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 ADCY7P51828 1080 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 CCNA1P78396 465 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 CAP1Q01518 475 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-208ENST00000634934 WDR78Q5VTH9 848 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 C17orf99Q6UX52 265 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 C6orf50Q9HD87 102 aa16.58■□□□□ 0.24
LINC00339-208ENST00000634934 COL11A1P12107 1806 aaPredicted RBP16.57■□□□□ 0.24
LINC00339-208ENST00000634934 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
LINC00339-208ENST00000634934 BCRP11274 1271 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 ERCC3P19447 782 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 MUM1L1Q5H9M0 696 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 PHF20Q9BVI0 1012 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 A0A0G2JMZ2 1700 aa16.57■□□□□ 0.24
LINC00339-208ENST00000634934 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 NFIBO00712 420 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 STX6O43752 255 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 MMP1P03956 469 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 XRCC6P12956 609 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00339-208ENST00000634934 CALML3P27482 149 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 GNA11P29992 359 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 COPB2P35606 906 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00339-208ENST00000634934 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 CHST13Q8NET6 341 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 CUL5Q93034 780 aa16.56■□□□□ 0.24
LINC00339-208ENST00000634934 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms