RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 NFKBIBQ15653 356 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 HSP90AB2PQ58FF8 381 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 UBE2R2Q712K3 238 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 RNF180Q86T96 592 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 FAM20CQ8IXL6 584 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 GSTCDQ8NEC7 633 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 ATL2Q8NHH9 583 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 PIWIL2Q8TC59 973 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 ZDHHC15Q96MV8 337 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 DUSP23Q9BVJ7 150 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 TARS2Q9BW92 718 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 KCNF1Q9H3M0 494 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 GFOD1Q9NXC2 390 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 MAP3K4Q9Y6R4 1608 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 TBX1O43435 398 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 OPA1O60313 960 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 EOMESO95936 686 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 POU3F2P20265 443 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 IGFALSP35858 605 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 CDK5R2Q13319 367 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 CLEC16AQ2KHT3 1053 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 CYP27C1Q4G0S4 372 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 C22orf34Q6ZV56 151 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 BRAPQ7Z569 592 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 DDX42Q86XP3 938 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 DZIP1LQ8IYY4 767 aaKnown RBP6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 DCAF4Q8WV16 495 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 STAG1Q8WVM7 1258 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 LGR4Q9BXB1 951 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 TRIM39Q9HCM9 518 aa6.82□□□□□ -1.32
TRAPPC9-216ENST00000634178 KIAA0586Q9BVV6 1533 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 UHRF1BP1LA0JNW5 1464 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 BIVM-ERCC5R4GMW8 1640 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 IGF2BP3O00425 579 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 DYNC1LI2O43237 492 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 C6orf222P0C671 652 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 SDSP20132 328 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 ECI1P42126 302 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 NEK4P51957 841 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 RBM10P98175 930 aaKnown RBP6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 ADGRE1Q14246 886 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 JAMLQ86YT9 394 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 SLC7A14Q8TBB6 771 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 ZFYVE21Q9BQ24 234 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 SLC52A2Q9HAB3 445 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 C1GALT1Q9NS00 363 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 ASXL2Q76L83 1435 aa6.81□□□□□ -1.32
TRAPPC9-216ENST00000634178 BRINP1O60477 761 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 DNAJC8O75937 253 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 CBX7O95931 251 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 DOC2BQ14184 412 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 MBTPS1Q14703 1052 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 DHCR24Q15392 516 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 ODR4Q5SWX8 454 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 SLC35F1Q5T1Q4 408 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 RSPO2Q6UXX9 243 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 BEND4Q6ZU67 534 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 TXNRD3Q86VQ6 643 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 ANKLE2Q86XL3 938 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 AFAP1L2Q8N4X5 818 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 UBR7Q8N806 425 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 TMEM145Q8NBT3 493 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 DAGLBQ8NCG7 672 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 LEO1Q8WVC0 666 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 CCDC136Q96JN2 1154 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 GPR55Q9Y2T6 319 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC9-216ENST00000634178 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 GNAT3A8MTJ3 354 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 VAMP4O75379 141 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 FAM87AP0C7U9 286 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 ENDOUP21128 410 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 CDKN1CP49918 316 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 SNW1Q13573 536 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 CFAP100Q494V2 611 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 ZMYM1Q5SVZ6 1142 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 STYK1Q6J9G0 422 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 OGFOD3Q6PK18 319 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 USP53Q70EK8 1073 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 ZNF655Q8N720 491 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 FAM83CQ9BQN1 747 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 CHPF2Q9P2E5 772 aa6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 TNPO3Q9Y5L0 923 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-216ENST00000634178 PTPRGP23470 1445 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 EPRSP07814 1512 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 MEFVO15553 781 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 LRRN2O75325 713 aa6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 PARNO95453 639 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-216ENST00000634178 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms