RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 PCDHB12Q9Y5F1 795 aa7.74□□□□□ -1.17
LINC00254-202ENST00000633813 ADGRF5Q8IZF2 1346 aa7.74□□□□□ -1.17
LINC00254-202ENST00000633813 MYOM2P54296 1465 aa7.74□□□□□ -1.17
LINC00254-202ENST00000633813 CFAP65Q6ZU64 1925 aaKnown RBP7.74□□□□□ -1.17
LINC00254-202ENST00000633813 ROCK2O75116 1388 aaKnown RBP7.73□□□□□ -1.17
LINC00254-202ENST00000633813 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 ZFYVE9O95405 1425 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00254-202ENST00000633813 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
LINC00254-202ENST00000633813 PMS1P54277 932 aaKnown RBP7.73□□□□□ -1.17
LINC00254-202ENST00000633813 GAB4Q2WGN9 574 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 MCTP1Q6DN14 999 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
LINC00254-202ENST00000633813 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 PRDM7Q9NQW5 492 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 ADAMTS6Q9UKP5 1117 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 FBXL21Q9UKT6 434 aa7.73□□□□□ -1.17
LINC00254-202ENST00000633813 TMEM131LA2VDJ0 1609 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 ESR1P03372 595 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 TAL1P17542 331 aaPredicted RBP7.72□□□□□ -1.17
LINC00254-202ENST00000633813 EGR3Q06889 387 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 ATG4DQ86TL0 474 aaPredicted RBP7.72□□□□□ -1.17
LINC00254-202ENST00000633813 DAGLBQ8NCG7 672 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 LRRN4CLQ8ND94 238 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00254-202ENST00000633813 SHDQ96IW2 340 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 C14orf93Q9H972 538 aaKnown RBP7.72□□□□□ -1.17
LINC00254-202ENST00000633813 A2ML1A8K2U0 1454 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 NLRP1Q9C000 1473 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 NRXN1Q9ULB1 1477 aa7.72□□□□□ -1.17
LINC00254-202ENST00000633813 WASH4PA8MWX3 477 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 SIGLEC6O43699 453 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 JUNBP17275 347 aaPredicted RBP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 ARID5AQ03989 594 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 AUHQ13825 339 aaKnown RBP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 PPP2R5EQ16537 467 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 ZNF655Q8N720 491 aaPredicted RBP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 HIRIP3Q9BW71 556 aaPredicted RBP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 HDAC8Q9BY41 377 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
LINC00254-202ENST00000633813 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 USP47Q96K76 1375 aa7.71□□□□□ -1.18
LINC00254-202ENST00000633813 ADAMTSL3P82987 1691 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 FER1L4A9Z1Z3 1794 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 NEXMIFQ5QGS0 1516 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 SSU72P8A0A1W2PR75 194 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 ZYXQ15942 572 aaKnown RBP7.7□□□□□ -1.18
LINC00254-202ENST00000633813 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 C7orf61Q8IZ16 206 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 THEMISQ8N1K5 641 aaPredicted RBP7.7□□□□□ -1.18
LINC00254-202ENST00000633813 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 SLAMF8Q9P0V8 285 aa7.7□□□□□ -1.18
LINC00254-202ENST00000633813 ZNF214Q9UL59 606 aaPredicted RBP7.7□□□□□ -1.18
LINC00254-202ENST00000633813 PIK3C2GO75747 1445 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 ST20-MTHFSA0A0A6YYL1 179 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 C9IYK1 514 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 CASP7P55210 303 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 SNW1Q13573 536 aaKnown RBP7.69□□□□□ -1.18
LINC00254-202ENST00000633813 TDRD10Q5VZ19 366 aaKnown RBP7.69□□□□□ -1.18
LINC00254-202ENST00000633813 SLC43A3Q8NBI5 491 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 DHX38Q92620 1227 aaKnown RBP7.69□□□□□ -1.18
LINC00254-202ENST00000633813 CHST7Q9NS84 486 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 TMEM59LQ9UK28 342 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 PCDHA11Q9Y5I1 949 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 TRPM1Q7Z4N2 1603 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 MADDQ8WXG6 1647 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 C3P01024 1663 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 TMEM2Q9UHN6 1383 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 RIMS2Q9UQ26 1411 aa7.69□□□□□ -1.18
LINC00254-202ENST00000633813 KDM5AP29375 1690 aaKnown RBP7.68□□□□□ -1.18
LINC00254-202ENST00000633813 A0A1W2PQH9 124 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 ITGB5P18084 799 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 DNAJA1P31689 397 aaKnown RBP7.68□□□□□ -1.18
LINC00254-202ENST00000633813 GDNFP39905 211 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 AFMP43652 599 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
LINC00254-202ENST00000633813 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
LINC00254-202ENST00000633813 ANKRD39Q53RE8 183 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 RNF111Q6ZNA4 994 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 DSCC1Q9BVC3 393 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 CTNND2Q9UQB3 1225 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 EID1Q9Y6B2 187 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
LINC00254-202ENST00000633813 KIAA1210Q9ULL0 1709 aa7.67□□□□□ -1.18
LINC00254-202ENST00000633813 PPLO60437 1756 aa7.67□□□□□ -1.18
LINC00254-202ENST00000633813 TP53P04637 393 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 274.2 ms