RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
PHACTR4-209ENST00000633371 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 WNT7AO00755 349 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 MEIS2O14770 477 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 ATP2A1O14983 1001 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 FDX1P10109 184 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 XBP1P17861 261 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 KRT2P35908 639 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 CLK2P49760 499 aaKnown RBP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 TOB1P50616 345 aaPredicted RBP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 APLP1P51693 650 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 MUM1L1Q5H9M0 696 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 CPXCR1Q8N123 301 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 TXNRD2Q9NNW7 524 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
PHACTR4-209ENST00000633371 PDHXO00330 501 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 BAG4O95429 457 aaKnown RBP16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 CALML3P27482 149 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 ADCY7P51828 1080 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 DNM1Q05193 864 aaKnown RBP16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 UBE2SQ16763 222 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 CYP4F22Q6NT55 531 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
PHACTR4-209ENST00000633371 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 ABCB11O95342 1321 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 MANSC4A6NHS7 340 aaPredicted RBP16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 RASSF10A6NK89 507 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 CYP2C8P10632 490 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 OSBPP22059 807 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 OAZ1P54368 228 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 Q3C1V9 767 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 USP17L6PQ6QN14 398 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 CCDC12Q8WUD4 166 aaPredicted RBP16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 CCDC102AQ96A19 550 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 PSTPIP2Q9H939 334 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
PHACTR4-209ENST00000633371 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 NFIBO00712 420 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 ALAS1P13196 640 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 GHRHRQ02643 423 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 MRPL11Q9Y3B7 192 aaKnown RBP16.3■□□□□ 0.2
PHACTR4-209ENST00000633371 AOC2O75106 756 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 GNA11P29992 359 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 STAT3P40763 770 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 SNRNP48Q6IEG0 339 aaKnown RBP16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 MB21D1Q8N884 522 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 CUL5Q93034 780 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 PGBD1Q96JS3 809 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
PHACTR4-209ENST00000633371 PIK3CDO00329 1044 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 TM4SF4P48230 202 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 HSD17B4P51659 736 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 HTRA3P83110 453 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 NBR1Q14596 966 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 DEFB115Q30KQ5 88 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 IFNL1Q8IU54 200 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 MOV10L1Q9BXT6 1211 aaKnown RBP16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 CLIC4Q9Y696 253 aa16.28■□□□□ 0.2
PHACTR4-209ENST00000633371 PLXNB2O15031 1838 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 TRAF1Q13077 416 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 CAPNS2Q96L46 248 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 PAGR1Q9BTK6 254 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 BRMS1Q9HCU9 246 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
PHACTR4-209ENST00000633371 PLS1Q14651 629 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 PTPAQ15257 358 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 INF2Q27J81 1249 aa16.26■□□□□ 0.19
PHACTR4-209ENST00000633371 TKFCQ3LXA3 575 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms