RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 DTWD2Q8NBA8 298 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 TRMT13Q9NUP7 481 aaKnown RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 CLEC1BQ9P126 229 aa7.54□□□□□ -1.2
LINC00649-220ENST00000628906 ZBTB47Q9UFB7 747 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 TEP1Q99973 2627 aaKnown RBP7.54□□□□□ -1.2
LINC00649-220ENST00000628906 WDFY3Q8IZQ1 3526 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 MYH2Q9UKX2 1941 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 TENM4Q6N022 2769 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 ABHD14A-ACY1A0A1B0GW23 586 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 LINC01565O15544 149 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 BRD1O95696 1058 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 SLC25A27O95847 323 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 AOC1P19801 751 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 FGFR2P21802 821 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 GTF2F1P35269 517 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00649-220ENST00000628906 GPNMBQ14956 572 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 CCDC144BQ3MJ40 725 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 PRR23BQ6ZRT6 265 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-220ENST00000628906 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 RASEFQ8IZ41 740 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 KREMEN2Q8NCW0 462 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 LINS1Q8NG48 757 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 MMP19Q99542 508 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 RPAP3Q9H6T3 665 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-220ENST00000628906 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 ZHX1Q9UKY1 873 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-220ENST00000628906 LHX6Q9UPM6 363 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 SORCS3Q9UPU3 1222 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-220ENST00000628906 HECTD1Q9ULT8 2610 aa7.53□□□□□ -1.2
LINC00649-220ENST00000628906 FANCMQ8IYD8 2048 aa7.52□□□□□ -1.2
LINC00649-220ENST00000628906 SPTA1P02549 2419 aa7.52□□□□□ -1.2
LINC00649-220ENST00000628906 HAX1O00165 279 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 GDF11O95390 407 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ARP10275 920 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 TGM1P22735 817 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 EVX2Q03828 476 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ZYXQ15942 572 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 LRRFIP1Q32MZ4 808 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 SOWAHCQ53LP3 525 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 VARS2Q5ST30 1063 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 CCDC30Q5VVM6 783 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 CWF19L1Q69YN2 538 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ZC3H14Q6PJT7 736 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 TMEM192Q8IY95 271 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 SUSD6Q92537 303 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 SPOCK2Q92563 424 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 RTP3Q9BQQ7 232 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 LMAN2LQ9H0V9 348 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 DHX36Q9H2U1 1008 aaKnown RBP7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ABHD16BQ9H3Z7 469 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 INCENPQ9NQS7 918 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ASTN1O14525 1302 aa7.52□□□□□ -1.21
LINC00649-220ENST00000628906 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-220ENST00000628906 EFCAB14O75071 495 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 IFIT1P09914 478 aaKnown RBP7.51□□□□□ -1.21
LINC00649-220ENST00000628906 NPR3P17342 541 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 NDUFV1P49821 464 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 PSMC6P62333 389 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 ZNF200P98182 395 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-220ENST00000628906 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 PLS1Q14651 629 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 METTL24Q5JXM2 366 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 CNKSR3Q6P9H4 555 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 MAGEB6Q8N7X4 407 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 BORCS6Q96GS4 357 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 FEZ1Q99689 392 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 MFSD1Q9H3U5 465 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 IGFLR1Q9H665 355 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 ANKFY1Q9P2R3 1169 aa7.51□□□□□ -1.21
LINC00649-220ENST00000628906 SLC30A4O14863 429 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 ZEB2O60315 1214 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 CXCL10P02778 98 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 FSCN1Q16658 493 aaKnown RBP7.5□□□□□ -1.21
LINC00649-220ENST00000628906 LRRC24Q50LG9 513 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 FAM117BQ6P1L5 589 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 ZNF467Q7Z7K2 595 aaPredicted RBP7.5□□□□□ -1.21
LINC00649-220ENST00000628906 FBXO11Q86XK2 927 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 ACER1Q8TDN7 264 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 TRIM35Q9UPQ4 493 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 GNEQ9Y223 722 aaKnown RBP7.5□□□□□ -1.21
LINC00649-220ENST00000628906 PIEZO2Q9H5I5 2752 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 MROH7-TTC4A0A0A0MT08 1334 aa7.5□□□□□ -1.21
LINC00649-220ENST00000628906 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
LINC00649-220ENST00000628906 SRRM3A6NNA2 597 aaPredicted RBP7.49□□□□□ -1.21
LINC00649-220ENST00000628906 C5orf67F2Z3F1 127 aa7.49□□□□□ -1.21
LINC00649-220ENST00000628906 GH2P01242 217 aa7.49□□□□□ -1.21
LINC00649-220ENST00000628906 RB1P06400 928 aa7.49□□□□□ -1.21
LINC00649-220ENST00000628906 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
LINC00649-220ENST00000628906 SMPD1P17405 629 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms