RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 PRDM14Q9GZV8 571 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 SCAND2PQ9GZW5 306 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 COPRSQ9NQ92 184 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 PODXL2Q9NZ53 605 aa5.67□□□□□ -1.5
VBP1-204ENST00000625964 POLR3KQ9Y2Y1 108 aaPredicted RBP5.67□□□□□ -1.5
VBP1-204ENST00000625964 SLPIP03973 132 aa5.66□□□□□ -1.5
VBP1-204ENST00000625964 DBHP09172 617 aa5.66□□□□□ -1.5
VBP1-204ENST00000625964 SNW1Q13573 536 aaKnown RBP5.66□□□□□ -1.5
VBP1-204ENST00000625964 HLA-DQA1Q5Y7H0 255 aa5.66□□□□□ -1.5
VBP1-204ENST00000625964 CHST13Q8NET6 341 aa5.66□□□□□ -1.5
VBP1-204ENST00000625964 DNAJA2O60884 412 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 F13A1P00488 732 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 RAG1P15918 1043 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 ZNF76P36508 570 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 LDLRAD1Q5T700 205 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 GOLM1Q8NBJ4 401 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.5
VBP1-204ENST00000625964 PRR13Q9NZ81 148 aa5.65□□□□□ -1.5
VBP1-204ENST00000625964 RECKO95980 971 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 SARSP49591 514 aaKnown RBP5.64□□□□□ -1.51
VBP1-204ENST00000625964 B3GNT8Q7Z7M8 397 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 TMEM52Q8NDY8 209 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 ANTXR1Q9H6X2 564 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 NTMQ9P121 344 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 VAV1P15498 845 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 VAMP1P23763 118 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 CCNFP41002 786 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 FANCCQ00597 558 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 MPP2Q14168 576 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 CRIP3Q6Q6R5 217 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 TTLL7Q6ZT98 887 aa5.64□□□□□ -1.51
VBP1-204ENST00000625964 UNCXA6NJT0 531 aa5.63□□□□□ -1.51
VBP1-204ENST00000625964 FZD7O75084 574 aa5.63□□□□□ -1.51
VBP1-204ENST00000625964 EIF4A3P38919 411 aaKnown RBP5.63□□□□□ -1.51
VBP1-204ENST00000625964 TBC1D10BQ4KMP7 808 aaPredicted RBP5.63□□□□□ -1.51
VBP1-204ENST00000625964 ZNF761Q86XN6 746 aaPredicted RBP5.63□□□□□ -1.51
VBP1-204ENST00000625964 PDLIM7Q9NR12 457 aa5.63□□□□□ -1.51
VBP1-204ENST00000625964 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
VBP1-204ENST00000625964 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
VBP1-204ENST00000625964 CLEC3AO75596 197 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 CORO7P57737 925 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 PRR5P85299 388 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 BICRALQ6AI39 1079 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 FBXL19Q6PCT2 694 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 FAM196AQ6ZSG2 479 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 JAMLQ86YT9 394 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 Q8N1X5 172 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 FBXO27Q8NI29 283 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 METTL5Q9NRN9 209 aaKnown RBP5.62□□□□□ -1.51
VBP1-204ENST00000625964 GMIPQ9P107 970 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 KIAA1522Q9P206 1035 aaPredicted RBP5.62□□□□□ -1.51
VBP1-204ENST00000625964 TSC22D4Q9Y3Q8 395 aa5.62□□□□□ -1.51
VBP1-204ENST00000625964 SUPT16HQ9Y5B9 1047 aaKnown RBP5.62□□□□□ -1.51
VBP1-204ENST00000625964 F8W031 263 aaPredicted RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 ASGR2P07307 311 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 GARTP22102 1010 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 REC114Q7Z4M0 266 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 USP48Q86UV5 1035 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 NAT16Q8N8M0 369 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 SH3RF3Q8TEJ3 882 aaPredicted RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 ZNF296Q8WUU4 475 aaPredicted RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 KISS1RQ969F8 398 aaPredicted RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 RNF34Q969K3 372 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 ADAMTS1Q9UHI8 967 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
VBP1-204ENST00000625964 MINPP1Q9UNW1 487 aa5.61□□□□□ -1.51
VBP1-204ENST00000625964 GSNP06396 782 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 CTSKP43235 329 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 CWF19L2Q2TBE0 894 aaKnown RBP5.6□□□□□ -1.51
VBP1-204ENST00000625964 ZNF394Q53GI3 561 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 CRB2Q5IJ48 1285 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 CYP2R1Q6VVX0 501 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 LGI4Q8N135 537 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 NLGN2Q8NFZ4 835 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 CDK5RAP1Q96SZ6 601 aaKnown RBP5.6□□□□□ -1.51
VBP1-204ENST00000625964 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 PCDHGB7Q9Y5F8 929 aa5.6□□□□□ -1.51
VBP1-204ENST00000625964 RTP2Q5QGT7 225 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 SPRED1Q7Z699 444 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 CPA5Q8WXQ8 436 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 ALG3Q92685 438 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 ZNF428Q96B54 188 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 SPON2Q9BUD6 331 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 SSBP3Q9BWW4 388 aaPredicted RBP5.59□□□□□ -1.51
VBP1-204ENST00000625964 KCNQ5Q9NR82 932 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 GFOD1Q9NXC2 390 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 UBP1Q9NZI7 540 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 HCFC2Q9Y5Z7 792 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 ROBO2Q9HCK4 1378 aa5.59□□□□□ -1.51
VBP1-204ENST00000625964 MEIS1O00470 390 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 GREM1O60565 184 aa5.58□□□□□ -1.52
VBP1-204ENST00000625964 ATE1O95260 518 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms