RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZEB2O60315 1214 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 B4GALT4O60513 344 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 TTLL1O95922 423 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 MS4A1P11836 297 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 SMPD1P17405 629 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 FBXO16Q8IX29 292 aaPredicted RBP17.5■□□□□ 0.39
PNKP-218ENST00000625299 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 SLC43A3Q8NBI5 491 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 SCLYQ96I15 445 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 AGBL1Q96MI9 1066 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 WNT8AQ9H1J5 351 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 EPB41L4AQ9HCS5 686 aaPredicted RBP17.5■□□□□ 0.39
PNKP-218ENST00000625299 MTMR4Q9NYA4 1195 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 DDX19BQ9UMR2 479 aa17.5■□□□□ 0.39
PNKP-218ENST00000625299 GNEQ9Y223 722 aaKnown RBP17.5■□□□□ 0.39
PNKP-218ENST00000625299 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 SOWAHBA6NEL2 793 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 ASB14A6NK59 587 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 ALAS1P13196 640 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 NKX3-2P78367 333 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 TFF2Q03403 129 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 GMCL1P1Q8NEA9 526 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 OSBP2Q969R2 916 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 MKL1Q969V6 931 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 FAM122AQ96E09 287 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 PDGFCQ9NRA1 345 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 REV3LO60673 3130 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
PNKP-218ENST00000625299 GRIN2DO15399 1336 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 GPAA1O43292 621 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 PLA2G5P39877 138 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 STAT2P52630 851 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
PNKP-218ENST00000625299 APPBP2Q92624 585 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 TRERF1Q96PN7 1200 aa17.48■□□□□ 0.39
PNKP-218ENST00000625299 FDX1P10109 184 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 ATP2A2P16615 1042 aaKnown RBP17.47■□□□□ 0.39
PNKP-218ENST00000625299 KCNQ1P51787 676 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 SNAP25P60880 206 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 TMEM63BQ5T3F8 832 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 ECHDC1Q9NTX5 307 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 SYNPO2Q9UMS6 1093 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 PCDHA11Q9Y5I1 949 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 ZNF536O15090 1300 aa17.47■□□□□ 0.39
PNKP-218ENST00000625299 M0R2C6 588 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 RFXAPO00287 272 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 GNAT2P19087 354 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 SLC1A4P43007 532 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 CHURC1Q8WUH1 139 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 CERS4Q9HA82 394 aa17.46■□□□□ 0.39
PNKP-218ENST00000625299 SCN5AQ14524 2016 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 RNF113AO15541 343 aaKnown RBP17.45■□□□□ 0.38
PNKP-218ENST00000625299 CA3P07451 260 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 CYP2C9P11712 490 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 BMP1P13497 986 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 MCCP23508 829 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 TFAP4Q01664 338 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 TTLL4Q14679 1199 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 TKFCQ3LXA3 575 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 IQSEC1Q6DN90 963 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 KCTD1Q719H9 257 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
PNKP-218ENST00000625299 TRMT13Q9NUP7 481 aaKnown RBP17.45■□□□□ 0.38
PNKP-218ENST00000625299 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
PNKP-218ENST00000625299 PRRC2BQ5JSZ5 2229 aaKnown RBP17.45■□□□□ 0.38
PNKP-218ENST00000625299 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
PNKP-218ENST00000625299 PDE4BQ07343 736 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 TMEM67Q5HYA8 995 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 TAPT1Q6NXT6 567 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 PURBQ96QR8 312 aaKnown RBP17.44■□□□□ 0.38
PNKP-218ENST00000625299 C1QTNF1Q9BXJ1 281 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 CYP39A1Q9NYL5 469 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 LCTP09848 1927 aa17.44■□□□□ 0.38
PNKP-218ENST00000625299 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
PNKP-218ENST00000625299 MYL3P08590 195 aa17.43■□□□□ 0.38
PNKP-218ENST00000625299 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
PNKP-218ENST00000625299 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
PNKP-218ENST00000625299 VWCEQ96DN2 955 aa17.43■□□□□ 0.38
PNKP-218ENST00000625299 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms