RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 UNCXA6NJT0 531 aa23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 MRPL12P52815 198 aaKnown RBP23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 STK38Q15208 465 aa23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 SLC38A10Q9HBR0 1119 aa23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 RAVER2Q9HCJ3 691 aaKnown RBP23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 NOL7Q9UMY1 257 aaKnown RBP23.29■■□□□ 1.32
PCDHB12-203ENST00000624949 PARP14Q460N5 1801 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 ZBED4O75132 1171 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 PROCA1Q8NCQ7 364 aaPredicted RBP23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 GPT2Q8TD30 523 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 PGBD1Q96JS3 809 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 PCDHB6Q9Y5E3 794 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 SMCHD1A6NHR9 2005 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 ZNF536O15090 1300 aa23.28■■□□□ 1.32
PCDHB12-203ENST00000624949 GOLGA6L3A6NEY3 463 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 VWA5AO00534 786 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 KIF3CO14782 793 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 ICAM1P05362 532 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 DSG3P32926 999 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 TRAF1Q13077 416 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 USP17L6PQ6QN14 398 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 RCOR1Q9UKL0 485 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 NASPP49321 788 aaPredicted RBP23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 INF2Q27J81 1249 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 KRT25Q7Z3Z0 450 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 LINC00301Q8NCQ3 95 aa23.27■■□□□ 1.32
PCDHB12-203ENST00000624949 TRPM7Q96QT4 1865 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 LOC285556D6RIA3 1793 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 WNT7AO00755 349 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 ELP1O95163 1332 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 RLFQ13129 1914 aa23.26■■□□□ 1.31
PCDHB12-203ENST00000624949 HUNKP57058 714 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 NONOQ15233 471 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 HOXC10Q9NYD6 342 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 OPLAHO14841 1288 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 YEATS4O95619 227 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 TTC38Q5R3I4 469 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 GLT8D2Q9H1C3 349 aa23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 MRPL11Q9Y3B7 192 aaKnown RBP23.25■■□□□ 1.31
PCDHB12-203ENST00000624949 SPDYE16A6NNV3 312 aaPredicted RBP23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 SPTLC2O15270 562 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 ALAS1P13196 640 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 MARCKSP29966 332 aaPredicted RBP23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 ME1P48163 572 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 CLK2P49760 499 aaKnown RBP23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 ZNF174Q15697 407 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 L1TD1Q5T7N2 865 aaKnown RBP23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 HOMER2Q9NSB8 354 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 AGTPBP1Q9UPW5 1226 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 ABCB11O95342 1321 aa23.24■■□□□ 1.31
PCDHB12-203ENST00000624949 GOLGA6L4A6NEF3 574 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 MEIS2O14770 477 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 CFBP00751 764 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 FDX1P10109 184 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 HOXA13P31271 388 aaPredicted RBP23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 UBE2HP62256 183 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 MOGSQ13724 837 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 SLC39A14Q15043 492 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 GAS2L3Q86XJ1 694 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 TBCKQ8TEA7 893 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 COL11A1P12107 1806 aaPredicted RBP23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 HOXA7P31268 230 aaPredicted RBP23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 IRX3P78415 501 aaPredicted RBP23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 PTPAQ15257 358 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 KCNG4Q8TDN1 519 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 TBC1D5Q92609 795 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 ADAMTS5Q9UNA0 930 aa23.23■■□□□ 1.31
PCDHB12-203ENST00000624949 MCM7P33993 719 aa23.22■■□□□ 1.31
PCDHB12-203ENST00000624949 TRAPPC10P48553 1259 aa23.22■■□□□ 1.31
PCDHB12-203ENST00000624949 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
PCDHB12-203ENST00000624949 PASKQ96RG2 1323 aa23.22■■□□□ 1.31
PCDHB12-203ENST00000624949 XRCC6P12956 609 aaKnown RBP eCLIP23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 PLS1Q14651 629 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 TMEM132BQ14DG7 1078 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 CAVIN1Q6NZI2 390 aaKnown RBP23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 REPS2Q8NFH8 660 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 P2RX7Q99572 595 aaKnown RBP23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 PCDHA7Q9UN72 937 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 LETM2Q2VYF4 491 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 SPRYD7Q5W111 196 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 GPAT2Q6NUI2 795 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 ASCC2Q9H1I8 757 aaPredicted RBP23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 MRVI1Q9Y6F6 885 aa23.21■■□□□ 1.31
PCDHB12-203ENST00000624949 GTF2A2P52657 109 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 SNRNP48Q6IEG0 339 aaKnown RBP23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 NEK8Q86SG6 692 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 ZNF214Q9UL59 606 aaPredicted RBP23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 GCOM1H8Y6P7 765 aaPredicted RBP23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 NFIBO00712 420 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 PEX10O60683 326 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 POLR2MP0CAP2 368 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 MUM1L1Q5H9M0 696 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 FCHSD1Q86WN1 690 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 MS4A4AQ96JQ5 239 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms