RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
TP53-227ENST00000622645 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 GPCPD1Q9NPB8 672 aa13.46□□□□□ -0.25
TP53-227ENST00000622645 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
TP53-227ENST00000622645 TADA3O75528 432 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 TPM1P09493 284 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 TXKP42681 527 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 ERVK-24P63145 666 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 PROM2Q8N271 834 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.26
TP53-227ENST00000622645 EPC1Q9H2F5 836 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 ABHD10Q9NUJ1 306 aa13.46□□□□□ -0.26
TP53-227ENST00000622645 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
TP53-227ENST00000622645 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 ACRBPQ8NEB7 543 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 AK8Q96MA6 479 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
TP53-227ENST00000622645 TRIM9Q9C026 710 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
TP53-227ENST00000622645 COA1Q9GZY4 146 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 PSMA7O14818 248 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 ABL1P00519 1130 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 MYL1P05976 194 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 KRT9P35527 623 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 STK4Q13043 487 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
TP53-227ENST00000622645 MYH1P12882 1939 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 CLCN6P51797 869 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 DMTNQ08495 405 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 PDE4DQ08499 809 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 HPS3Q969F9 1004 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 CCDC51Q96ER9 411 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 FCER1AP12319 257 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 ASIC1P78348 528 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 STIM1Q13586 685 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 TTI2Q6NXR4 508 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 QTRT2Q9H974 415 aaKnown RBP13.44□□□□□ -0.26
TP53-227ENST00000622645 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
TP53-227ENST00000622645 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 SLC37A4O43826 429 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 EDIL3O43854 480 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 TDP2O95551 362 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 FECHP22830 423 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 TMTC1Q8IUR5 882 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 CHP1Q99653 195 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 DUSP9Q99956 384 aaKnown RBP13.43□□□□□ -0.26
TP53-227ENST00000622645 CUEDC2Q9H467 287 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 TTC26A0AVF1 554 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 PPP2R3AQ06190 1150 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 ASPRV1Q53RT3 343 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
TP53-227ENST00000622645 LGALS16A8MUM7 142 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 KIF5CO60282 957 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 TTLL1O95922 423 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 SRGNP10124 158 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 HSPA1LP34931 641 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 SLC16A2P36021 539 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ADCY7P51828 1080 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 NFIAQ12857 509 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 CALCRLQ16602 461 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ZNF569Q5MCW4 686 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ZNF507Q8TCN5 953 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 MTMR9Q96QG7 549 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 THAP9Q9H5L6 903 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 PLIN4Q96Q06 1357 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 PPP1R11O60927 126 aaPredicted RBP13.42□□□□□ -0.26
TP53-227ENST00000622645 EEF1GP26641 437 aaKnown RBP13.42□□□□□ -0.26
TP53-227ENST00000622645 SHMT1P34896 483 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 CDC42EP5Q6NZY7 148 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 CYP26C1Q6V0L0 522 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
TP53-227ENST00000622645 C7orf25Q9BPX7 421 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 MAGEF1Q9HAY2 307 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 LRWD1Q9UFC0 647 aa13.42□□□□□ -0.26
TP53-227ENST00000622645 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
TP53-227ENST00000622645 POTEMA6NI47 508 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 B4DLN1 442 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
TP53-227ENST00000622645 NKRFO15226 690 aaKnown RBP eCLIP13.41□□□□□ -0.26
TP53-227ENST00000622645 ZNF543Q08ER8 600 aa13.41□□□□□ -0.26
TP53-227ENST00000622645 TRIM14Q14142 442 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms